Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0089 ATGATCACAAAAATGATTAAAACAATCCTTCTCATCCCTTCTCAATTCATTATTTTCCTTCTCATCAACTCAGTACTACTCTCAGACACTGTAATGGCAGAACCAAGGGCAAGAACAATCCAAATAGCATGTGGTCATCAACTAGAGCACAATAGCACCATCTATGTTCCGAATTTCGTTGCAACCATGGAGAAAATCAGTGAACAGATGCGAAGTACCGGCTTTGGAACAACAGTTACAGGGACAGGACTTGATACTAACTATGGCCTAGCTCAGTGCTATGGAGATCTTTCATTGCTTGATTGTGTGCTATGTTATGCTGAGGCAAGGACGGTTCTTCCTCAGTGCTTCCCTTTCAATGGTGGCCGCATTTACCTCGATGGTTGCTTCATGAGGGCCGAGAATTATAGCTTCTTTGATGAGTATACAGGAGCAGGAGATAATGCAGTGTGTGGGAACAGAACAAGGAAGAACTCAAGTTTTCAAGAATCTGCAAAGCAAGCAATTCTAACAGCAGTTCAAGATGCACTTAGCAATAAAGGATATGCTAGAGGGAAGGTCGCCGTGGCCGGAACAGTTAATGAGTCTGCTTATGTGCTGGCTGATTGTTGGAGGACTTTGAACACAAGCTCTTGTAAAGCATGTCTTCAGAATGCATCAGCTTCTCTGTTGGGATGCTTGCCTTGGGAAGAAGGCCGCGCGCTTAACACCGGTTGCTTCATGAGGTTCTCAGACAAAGATTTCCTCAACAAGCAGCAGGAAAATGGAAGCTCAAAGGGTAATGTAATAGTTCTGGTGGTTGCAGTGGTTAGTTCATTGATTGTTTTTGTGGTTGGAATAGCTATTGGGATATATATCTTGAAACTTAGATACATTCAAAAGAAAAGAAGAGGTTCATATGATACAGAAAAGTTAGCAAAGTCCCTTCGCCGCAGTAGCCTGAATTTCAAGTACACTTCACTGGAAAGGGCTACTGGATCCTTTGATGAGACTAACAAGTTAGGACAAGGAGGATTTGGAACAGTTTACAAAGGAGTTCTACCTGATGGAAGAGAGATTGCTATCAAGAGGCTATATTTCAATAACAAACATAGAGCAGGAGATTTCTACAATGAAGTGAACATAATCAGTAGCGTGGAACACAAGAATCTAGTCCGACTGTTAGGATGCAGTTGTTCAGGACCCGAAAGCCTGCTTGTGTATGAATATCTGCCCAACAGAAGTCTCGATCGCTTCATTTTTGACAAGAATAAGGGAAGAGAACTGAACTGGGAGAAGAGATACGAAATCATCGTTGGGACAGCTGAAGGATTAGCATACCTACATGAGAATTCTAAAACCAAAATAATTCACAGAGATATAAAAGCCAGCAACATCCTCTTGGATGCAAAGCTTCGTGCTAAAATCGCAGATTTTGGCTTGGCTAGATCCTTTCAAGAAGATAAGAGCCATATAAGTACAGCTATTGCAGGAACTTTGGGTTATATGGCTCCAGAGTACATAGCTCATGGTCAGTTAACAGAAAAGGCAGATGTGTATAGTTTTGGAGTGCTACTGCTAGAGATAGTTACCGGGAGACAGAACAACAGGAGCAAAGCAGCTGAATATTCAGACAGCCTAATTACAGTGGCATGGAAACACTTTCAGTCAGGGACAGCTGAACAATTATTTGATCCAAATCTTCAGTTGCATGAAGACTACAACAACAGCAGTGTTAAGAATGAGATCTTAAGAGTGGTTCAAATAGGACTTCTATGCACCCAAGAGAACCATTTGTTGCGGCCAACTATGTCAAAAGTGCTGCAGATGCTAACAAAGAAGGAGGAGCAACTTGTTGCTCCTTCTAATCCACCTTTCCTAGATGAGAATACCATGGAATTCTGTGACATAAGTGGTGACCCATTTTTCCCTCTCGTTGCAGATGACTCAGTCGCTACCATGTCCCATAGCTCTTTTCATCCCAGGTGA 1968 0.4223 MITKMIKTILLIPSQFIIFLLINSVLLSDTVMAEPRARTIQIACGHQLEHNSTIYVPNFVATMEKISEQMRSTGFGTTVTGTGLDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPFNGGRIYLDGCFMRAENYSFFDEYTGAGDNAVCGNRTRKNSSFQESAKQAILTAVQDALSNKGYARGKVAVAGTVNESAYVLADCWRTLNTSSCKACLQNASASLLGCLPWEEGRALNTGCFMRFSDKDFLNKQQENGSSKGNVIVLVVAVVSSLIVFVVGIAIGIYILKLRYIQKKRRGSYDTEKLAKSLRRSSLNFKYTSLERATGSFDETNKLGQGGFGTVYKGVLPDGREIAIKRLYFNNKHRAGDFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLPNRSLDRFIFDKNKGRELNWEKRYEIIVGTAEGLAYLHENSKTKIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYIAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKAAEYSDSLITVAWKHFQSGTAEQLFDPNLQLHEDYNNSSVKNEILRVVQIGLLCTQENHLLRPTMSKVLQMLTKKEEQLVAPSNPPFLDENTMEFCDISGDPFFPLVADDSVATMSHSSFHPR* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0089 655 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 14 634 - -
Amo15g0089 655 ProSiteProfiles Gnk2-homologous domain profile. 37 138 IPR002902 -
Amo15g0089 655 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Amo15g0089 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Amo15g0089 655 Gene3D Phosphorylase Kinase; domain 1 290 403 - -
Amo15g0089 655 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Amo15g0089 655 SUPERFAMILY Protein kinase-like (PK-like) 312 626 IPR011009 -
Amo15g0089 655 Gene3D Transferase(Phosphotransferase) domain 1 404 616 - -
Amo15g0089 655 Pfam Protein tyrosine and serine/threonine kinase 331 604 IPR001245 GO:0004672|GO:0006468
Amo15g0089 655 Pfam Salt stress response/antifungal 53 136 IPR002902 -
Amo15g0089 655 Pfam Salt stress response/antifungal 154 245 IPR002902 -
Amo15g0089 655 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 14 634 - -
Amo15g0089 655 Gene3D - 37 138 IPR038408 -
Amo15g0089 655 Gene3D - 148 248 IPR038408 -
Amo15g0089 655 SMART serkin_6 328 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0089 655 CDD STKc_IRAK 334 606 - -
Amo15g0089 655 ProSiteProfiles Protein kinase domain profile. 328 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0089 Amo-Chr15 3010223 3013480 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0089 31 655 Receptor kinase-like Gene Family AT1G70520 68.262 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo15g0089 PK_Tyr_Ser-Thr 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0089 - - gmx:100305420 1058.51