Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0085 ATGAAGAGAACAGACTCTTTCATCTCCTCTCAATGCTTTGTTTACCTCATCATTGAAGCACTGTTACTATCAGAGAGTTCAATAGCAGAACCAAGGGCGAAAACGATCCAAATTACATGTGGCAATCAATTTGAGCACAACAACACCACCTTTGTTCCGAATTTCGTTACAGCCATGGACAATATCACTCAACAGATTAGCACTAACATCTTTGCAACAGCAGTTGCAGGCACAGGACCAGACACTAACTATGGCCTGTTTCAGTGCTATGGCGATCTTTCCTTACTCGATTGCGCATTGTGTAACGCTGAGGCACGCACGGTTCTTGCTGGATGCTTCCCTTATAACGGTGGTCGAATTTACCTTGATGGTTGCTTCATGAGGGTTCAGAACTATAGTTTCTTTAATCAGTATTCAGGAGCAGGAGACAAGGCTATATGTGGGAACACAACTAGGAAGAACTCGAGTTTTCAAGCAGCAGCAAAGCAAGCAATTTCAACAGCAGTTCAAGATGCACCAAACAACCTTGGCTATGCTAGAGTTAAGGTTTCTGTGTCAGGAACAATTAATGCGTCCGCTTATGTTCTGGCTGATTGTTGGAGGAATTTGGACCCAAGATCCTGCAAAGCATGTCTTGAGAACGCATCTTCTTCTATATTCGGATGCTTGCCTTGGTCGGAAGGGCGAGCACTTAACACCGGTTGCTTCATGAGGTACTCAGACACAGATTTTCTCAACAAGGAACAAGAAAATGGGAGTTCAAAAGTGAACGTAGCAGTGCTAGTTGTTCCAATAGTCAGTTCAGTGGTTGTTCTGGTGGTTGGAATTGTTATTGGGATTTATATCTGGAAACACAGATACATTCAAAACAAAAGAAGAGGTTCATATGATGTGAAAAAACTAGCAAAGTCCCTTCACTGCAGTGGCTTGAATTTCAAGTACTCTACACTGGAAAAGGCGACTGGATCCTTTGATGATGCTAACAAGTTAGGCCAAGGAGGATTCGGAACAGTTTATAAGGGAGTTCTACCTGATGGAAGACAGATTGCCGTCAAGCGGTTATATTTCAACAACAGACATAGAGCTTTGGATTTCTACAATGAAGTTAACATAATTAGCCGAATCGAACACAAGAATCTAGTTAGACTGTTAGGCTGCAGCTGTTCAAGACCTGAAAGCTTGCTTGTATATGAATTTCTTCCCAACAGAAGTCTTGACTGCTTCATTTTTGACAGAAATAAGGGAAGGGAACTGAAATGGGAGAAGAGATATGAAATTATTGTTGGGACAGCTGAAGGACTAGTTTACCTGCATGAGAACTCTGAAATCAGGATAATTCACAGAGATATAAAAGCCAGCAACATCCTATTGGATGCAAAGCTTCGTGCAAAAATTGCAGATTTTGGTTTGGCTAGATCCTTGCAAGAAGACAAGAGCCACATAAGTACAGCTATAGCAGGAACTTTGGGCTATATGGCTCCAGAGTACTTGGCTCATGGTCAGTTAACAGAAAAGGCCGATGTATATAGTTTTGGAGTGTTACTGTTAGAGACAGTTACCGGGAGACAGAACAACAGAGGCAAAACAACAGAATATTCAGACAACCTAGTTACAATTGTATGGAAGCATTTCCAGATGGGGACTGCAGCACAATTATTTGATCCAAATCTTCAGTTGCATAACCACAACAGCAGCAATACTAAGAATGAGGTTTTAAGAGTGGTTCATATAGGTCTTCTATGCATCCAAGAGAACCCTACACTGAGACCAACTATGTCAAAGGCACTACATATGTTAACAAAGAAGGAGGAGCACCTTGCTGCTCCCTATAATCCACCCTTCCTAGATGAGAGTACCATGGAACTGCACGACATGAGTAGCGACCCATCTTCCCCTCTCAATGTACCAACATCAATTGCTACCATGTCGCATAGCTCGTTTTATCCGAGGTGA 1953 0.4219 MKRTDSFISSQCFVYLIIEALLLSESSIAEPRAKTIQITCGNQFEHNNTTFVPNFVTAMDNITQQISTNIFATAVAGTGPDTNYGLFQCYGDLSLLDCALCNAEARTVLAGCFPYNGGRIYLDGCFMRVQNYSFFNQYSGAGDKAICGNTTRKNSSFQAAAKQAISTAVQDAPNNLGYARVKVSVSGTINASAYVLADCWRNLDPRSCKACLENASSSIFGCLPWSEGRALNTGCFMRYSDTDFLNKEQENGSSKVNVAVLVVPIVSSVVVLVVGIVIGIYIWKHRYIQNKRRGSYDVKKLAKSLHCSGLNFKYSTLEKATGSFDDANKLGQGGFGTVYKGVLPDGRQIAVKRLYFNNRHRALDFYNEVNIISRIEHKNLVRLLGCSCSRPESLLVYEFLPNRSLDCFIFDRNKGRELKWEKRYEIIVGTAEGLVYLHENSEIRIIHRDIKASNILLDAKLRAKIADFGLARSLQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLETVTGRQNNRGKTTEYSDNLVTIVWKHFQMGTAAQLFDPNLQLHNHNSSNTKNEVLRVVHIGLLCIQENPTLRPTMSKALHMLTKKEEHLAAPYNPPFLDESTMELHDMSSDPSSPLNVPTSIATMSHSSFYPR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0085 650 Gene3D - 32 134 IPR038408 -
Amo15g0085 650 Gene3D - 144 244 IPR038408 -
Amo15g0085 650 CDD STKc_IRAK 330 601 - -
Amo15g0085 650 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 10 631 - -
Amo15g0085 650 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Amo15g0085 650 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Amo15g0085 650 Pfam Salt stress response/antifungal 43 132 IPR002902 -
Amo15g0085 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Amo15g0085 650 SMART serkin_6 324 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0085 650 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Amo15g0085 650 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 10 631 - -
Amo15g0085 650 Gene3D Phosphorylase Kinase; domain 1 286 399 - -
Amo15g0085 650 Pfam Protein kinase domain 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0085 650 Gene3D Transferase(Phosphotransferase) domain 1 400 610 - -
Amo15g0085 650 ProSiteProfiles Protein kinase domain profile. 324 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0085 650 SUPERFAMILY Protein kinase-like (PK-like) 308 631 IPR011009 -
Amo15g0085 650 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0085 Amo-Chr15 2961795 2965023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0085 12 650 Receptor kinase-like Gene Family AT1G70520 63.807 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo15g0085 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0085 - - lja:Lj2g3v1415230.1 1013.06