Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0024 ATGACTCAAGTGATGGAGAGAGACGGCGTCGTTTCAGAAGAAGTTCATGTCTTAGCCGTCGATGATAGCCTCGTCGATCGGAAGGTCATTGAGCGCTTACTCAAAATCTCAGCTTGTAAAGTTACTGCTGTTGATAGTGGAATCAGTGCCCTGCAGTTACTGGGGCTGGACGAACAGAGAACATCTGAATCAGATGATTTTGTGGGTTTAAAGGTAGATCTAATTATCACAGATTATTGCATGCCTGGAATGTCTGGTTATGATTTGCTCAAAAAAATCAAGGGATCGTCCACTTTCAGAGAAATTCCGGTCGTCATCATGTCCTCGGAAAATATCTTGCCACGAATTGACAGATGCTTAGAGGAGGGAGCAAAGGATTTCATAGTAAAGCCAGTGAAGTTATCTGACGTGAAACGGTTGAAGAATTATATGAGCACCGCCAGCAGGGACGTTAGCGCCGCCGAAGCCGGAGGTTGCAGCGGTGGCGGTGGTGGTGGTGGAGGAGGAATTAACAAAAGGAAGCTTTCAGACACTACCGCCTTTGATTATCTGTCATCATCTCCACCGTCCATTTCGTCCTCAATAACCCCCTTATCATCGCCGTCCGAGTCTTCTTCATCGCCTTCTCCGTCGCCATTATCTTCGCCCATCAGATCGCTTGATTCTCCAATCCGACGGCTTAAAATGACCGGCGGAGATTGA 702 0.4729 MTQVMERDGVVSEEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGISALQLLGLDEQRTSESDDFVGLKVDLIITDYCMPGMSGYDLLKKIKGSSTFREIPVVIMSSENILPRIDRCLEEGAKDFIVKPVKLSDVKRLKNYMSTASRDVSAAEAGGCSGGGGGGGGGINKRKLSDTTAFDYLSSSPPSISSSITPLSSPSESSSSPSPSPLSSPIRSLDSPIRRLKMTGGD* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0024 233 CDD REC_typeA_ARR 17 140 - -
Amo15g0024 233 MobiDBLite consensus disorder prediction 185 233 - -
Amo15g0024 233 Gene3D - 15 160 - -
Amo15g0024 233 SUPERFAMILY CheY-like 15 139 IPR011006 -
Amo15g0024 233 MobiDBLite consensus disorder prediction 185 218 - -
Amo15g0024 233 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 9 231 - -
Amo15g0024 233 Pfam Response regulator receiver domain 17 137 IPR001789 GO:0000160
Amo15g0024 233 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 231 IPR045279 GO:0009736
Amo15g0024 233 SMART REC_2 15 144 IPR001789 GO:0000160
Amo15g0024 233 ProSiteProfiles Response regulatory domain profile. 16 145 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0024 Amo-Chr15 683516 685314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0024 12 225 Response Regulator Gene Family AT1G59940 55.251 7.03e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo15g0024 Response_reg 5.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0024 K14492 - gmx:100779833 233.032