Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0013 GGGAAACTGAAGGAAATTGAACCGCGTGAACTTAAGGAAATTGAAACAAACCCCCCTTCTTTCTTTCCCCAATTCATAACCCTAGCCCCCATTGTCGCCGCCGTCGGAAGCTTGTTGGCGCCGCCGCCGTCCCAAGCTCTAAGGACATCGTCTTTATCTTCCTTGGCTTCTCCGTTCGTCGAAGCAGCAGGGTGGCTTTTAGACTTGTCAAATTCAGTAGCAAGTTCTTCACCAAGCCTTCTACCAATTGTTAGAGGAACTATCGAAAGGTATAAGAAAGCAAGTGCTGCTTCCTCAAACACAGAATCTGTATCTGAAGCTAATACACAGTTTTATCAGCAAGAATCATCCAAATTAAGAAGACAGATTCGTGATATTCAAAATCTAAATAGGCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGCCTCAAGGAACTAAAGAACCTTGAGAGTAGATTGGAGAAAGGTTTAAGCAGAGTTCGATCTAGAAAGGTATAG 498 0.4398 GKLKEIEPRELKEIETNPPSFFPQFITLAPIVAAVGSLLAPPPSQALRTSSLSSLASPFVEAAGWLLDLSNSVASSSPSLLPIVRGTIERYKKASAASSNTESVSEANTQFYQQESSKLRRQIRDIQNLNRHILGEALSSLSLKELKNLESRLEKGLSRVRSRKV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0013 165 Pfam K-box region 107 164 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo15g0013 165 Coils Coil 143 163 - -
Amo15g0013 165 PANTHER MADS-BOX TRANSCRIPTION FACTOR ARLEQUIN 84 164 - -
Amo15g0013 165 Coils Coil 112 132 - -
Amo15g0013 165 ProSiteProfiles K-box domain profile. 109 165 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo15g0013 165 PANTHER SERUM RESPONSE FACTOR HOMOLOG 84 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0013 Amo-Chr15 328302 330025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0013 84 164 MADS-box Gene Family AT2G42830 77.778 8.32e-40 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0013 K09264 - ahf:112748212 227.254