Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4204 ATGGCATTCCCACCACCACCCTCTTCACAAAGTGCTAATAATTTCATCTTCCACAATCATGAACACCAACCAGATCATCATCATCATCATCATCACCAACCCTTCTCTTCTAACTCCCTCAATTCCTTCCCCTCTTTGCCAATTCCTTCCCATCACCACTTCTTAGGTCAACCACACAACACACCCTCTCTCTTTCTCAAGATGGGTTCACACCAATTCTTAGGGGGTGGTGGACCTTTCATGTTGAAAAGATCCATGTCATTTTCAGGGATCGAGAACAAGTGCGGCGGCGACGGCGACGACGACCTATCGGATGACGGATTCGGGTTCCAATTTGGGGAGAAGAAAAAGAGGCTGAACATTGAACAAGTGAAAGCACTTGAGAAGAGTTTTGAGTTAGGGAACAAGCTTGAACCTGAAAGAAAGGTTCAACTTGCTAAGGCCCTTAACTTGCAACCGAGACAAATTGCTATTTGGTTTCAGAATCGGAGGGCAAGGTGGAAGACTAAGCAACTTGAAAGGGAATATGAATCTCTTAAGAAGCAGTTTGAAGCATTGAAGGTTGATAATGATGCACTTAAGGTTCAGAATCAGAAATTACATGCTGAGTTACAGGCCCTAATCAAAGGAAAGGAGTATTATTGTGAAGAAGATGGAGCAATAATAAGCAACCTTAATAAGAAAGAAGCTGGAGAGGGTTCATGGAGTAATAATAATAATAATAATAATAATAATGGTTGCAGTGACAATAATAATATTTCATCTTCAGACATTAACTTAGATCTCTCAACAACACCAATTATAAACACTAGTCCAGTATCTTCTCAAAATGCCAAAACTACCCTTGAATCCAATAATGATAATTCTCTAAAACCCAACAACAACATAATTCAGCTCCTCCAATACTCACCATCATCATCATCAAGACCACAAGGAATTCCTCATCAAGATGAAGGCTTATGCAACATGTTTCATCACCAAATTGAAGATCAACAGAATCTGTGGCCCTGGCCTGAACACCAGCCTCATAATAATTTCCACTGA 1044 0.4042 MAFPPPPSSQSANNFIFHNHEHQPDHHHHHHHQPFSSNSLNSFPSLPIPSHHHFLGQPHNTPSLFLKMGSHQFLGGGGPFMLKRSMSFSGIENKCGGDGDDDLSDDGFGFQFGEKKKRLNIEQVKALEKSFELGNKLEPERKVQLAKALNLQPRQIAIWFQNRRARWKTKQLEREYESLKKQFEALKVDNDALKVQNQKLHAELQALIKGKEYYCEEDGAIISNLNKKEAGEGSWSNNNNNNNNNGCSDNNNISSSDINLDLSTTPIINTSPVSSQNAKTTLESNNDNSLKPNNNIIQLLQYSPSSSSRPQGIPHQDEGLCNMFHHQIEDQQNLWPWPEHQPHNNFH* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4204 347 MobiDBLite consensus disorder prediction 229 250 - -
Amo14g4204 347 Pfam Homeodomain 115 168 IPR001356 GO:0003677
Amo14g4204 347 SUPERFAMILY Homeodomain-like 102 172 IPR009057 -
Amo14g4204 347 CDD homeodomain 115 171 IPR001356 GO:0003677
Amo14g4204 347 MobiDBLite consensus disorder prediction 269 292 - -
Amo14g4204 347 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT7 12 346 - -
Amo14g4204 347 ProSitePatterns 'Homeobox' domain signature. 145 168 IPR017970 GO:0000981|GO:0006355
Amo14g4204 347 ProSiteProfiles 'Homeobox' domain profile. 110 170 IPR001356 GO:0003677
Amo14g4204 347 Coils Coil 162 203 - -
Amo14g4204 347 Gene3D - 111 179 - -
Amo14g4204 347 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 12 346 IPR045224 GO:0003700
Amo14g4204 347 MobiDBLite consensus disorder prediction 21 42 - -
Amo14g4204 347 SMART HOX_1 113 174 IPR001356 GO:0003677
Amo14g4204 347 Pfam Homeobox associated leucine zipper 170 207 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4204 Amo-Chr14 147858449 147861573 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4204 53 339 Homeobox Transcription Factor Family AT5G15150 46.278 2.67e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Amo14g4204 Homeodomain 8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4204 K09338 - gmx:100816097 286.96