Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4196 ATGGCATTCCCACCACCACCTTCTTCACAAAGTGCTAATAATTTCATCTTCCACAATCATGAACACCAACCAGATCATCATCATCATCATCATCACCAACCCTTCTCTTCTAATTCCCTCAATTCCTTCCCCTCTTTGCCAATTCCTTCCCATCACCACTTCTTAGGTCAACCACACAACACACCCTCTCTCTTTCTCAAGATGGGTTCACACCAATTCTTAGGGGGTGGTGGACCTTTCATGTTGAAAAGATCCATGTCATTTTCAGGGATCGAGAATAAGTGCGGCGGCGACGGCGACGACGACCTATCGGACGACGGATTCGGGTTCCAATTTGGGGAGAAGAAAAAGAGGCTGAACATTGAACAAGTGAAAGCACTTGAGAAGAGTTTTGAGTTAGGGAACAAGCTTGAACCTGAAAGAAAGGTTCAACTTGCTAAGGCCCTTAACTTGCAACCGAGACAAATTGCTATTTGGTTTCAGAATCGGAGGGCAAGGTGGAAAACTAAGCAACTTGAAAGGGAATATGAATCTCTTAAGAAGCAGTTTGAAGCATTGAAGGTTGATAATGATGCACTTAAGGTTCAGAATCAAAAATTACATGCTGAGTTACAGGCCCTAATCAAAGGAAAGGAGTATTATTGTGAAGAAGAAGATGGAGCAATAATAAGCAACCTTAATAAGAAAGAAGCGGGAGAGGGTTCATGGAGTAATAATAATAATAATAATGGTTGTAGTGACAATAATAATATCTCATCATCAGACATTAACTTAGATCTCTCAACAACACCAATTATAAACACTAGTCCAGTATCTTCTCAAAATGCCAAAACTACCCTTGAATCCAATAATGATAATTCTCTAAAGCCCAACAACATAATTCAGCTCCTCCAATACTCACCACCATCATCATCAAGACCACAAGGAATTCCTCATCAGGATGAAGGCTTATGCAACATGTTTCATCACCAAATTGATGATCAACAGAATCTGTGGCCCTGGCCTGAACACCAGCCTCATAATAATTTCCACTGA 1035 0.4077 MAFPPPPSSQSANNFIFHNHEHQPDHHHHHHHQPFSSNSLNSFPSLPIPSHHHFLGQPHNTPSLFLKMGSHQFLGGGGPFMLKRSMSFSGIENKCGGDGDDDLSDDGFGFQFGEKKKRLNIEQVKALEKSFELGNKLEPERKVQLAKALNLQPRQIAIWFQNRRARWKTKQLEREYESLKKQFEALKVDNDALKVQNQKLHAELQALIKGKEYYCEEEDGAIISNLNKKEAGEGSWSNNNNNNGCSDNNNISSSDINLDLSTTPIINTSPVSSQNAKTTLESNNDNSLKPNNIIQLLQYSPPSSSRPQGIPHQDEGLCNMFHHQIDDQQNLWPWPEHQPHNNFH* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4196 344 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT7 12 343 - -
Amo14g4196 344 MobiDBLite consensus disorder prediction 267 289 - -
Amo14g4196 344 SUPERFAMILY Homeodomain-like 102 172 IPR009057 -
Amo14g4196 344 CDD homeodomain 115 171 IPR001356 GO:0003677
Amo14g4196 344 Pfam Homeobox associated leucine zipper 170 207 IPR003106 GO:0006355|GO:0043565
Amo14g4196 344 Pfam Homeodomain 115 168 IPR001356 GO:0003677
Amo14g4196 344 ProSitePatterns 'Homeobox' domain signature. 145 168 IPR017970 GO:0000981|GO:0006355
Amo14g4196 344 ProSiteProfiles 'Homeobox' domain profile. 110 170 IPR001356 GO:0003677
Amo14g4196 344 Coils Coil 162 203 - -
Amo14g4196 344 Gene3D - 111 179 - -
Amo14g4196 344 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 12 343 IPR045224 GO:0003700
Amo14g4196 344 MobiDBLite consensus disorder prediction 21 42 - -
Amo14g4196 344 SMART HOX_1 113 174 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4196 Amo-Chr14 147676959 147679924 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4196 71 336 Homeobox Transcription Factor Family AT5G15150 45.890 5.34e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Amo14g4196 Homeodomain 7.9e-15 CL0123