Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4153 ATGGCTATGGTGGTAGTAACACTTCTTCTTTTGGGCACATTGATGGTGAGTCTGCTACTTAAGGTGGCCTATGAAACCATCTCATGCTACTGGCTAACCCCGCTGCGAATCAAGAAGATCATGGAGATGCAAGGCGTCCGTGGCCCAAAGCCCAGATTCTTCAGCGGCAACATCTTGGACATGGCTTCTCTTATCTCCAAAACAACCTCTAATGACATGAAAACCATAAACCATGATATCGTGGGTCGCCTCCTCCCGCACTTTCTCCTCTGGTCCTCCCAATATGGTAAGAGATTTGTATATTGGAACGGAACGGAACCAAGATTGTGTATAGCAGAGACAGAATTGATCAGAGAGTTTCTTTCTAAATGTAGCACGGTTTCCGGGCGGTCATGGCACCAAAGGCAGGGATCAAAGCATTTCATTGGAGGAGGATTGTTGATGGCCAATGGCCAAGATTGGTACCATCAACGCCACATCGTTGCCCCTGCTTTTGGCGGAGACAGGCTCAAAGGATATGCAGGGCACATGGTTGAATGCACCAAAGAAATGCTTCAATCTCTGCAAAACGCATTGGATAGTGGCCGAACCGAAGTGGAGATTGGCGAATACATGACCAAACTCACTGCTGATATTATTTCTAGAACCGAGTTCGGCACAAGCTACCAGAAGGGCAAGAAGATATTCCATCTTCTGAAAGTTCTGCAGACTCGTTGTGCTCAAGCTAGTCGCCATCTTTGCTTTCCAGGAAGCAGGTATTTTCCGAGCAAGTATAACAGAGAGATAAAGTCGTTGAAGATGGAAGTAGAGAAACTATTAATGGAAATAATACAGAGTAGAAAAGACTGCGTCGAAATTGGAAGGAGTGAGTCGTATGGAAATGATTTGTTAGGAATGTTGCTGAACGAGATGGAAAAGAAAAATAGTTTGGATCTTCAGTTGGTAATGGATGAATGTAAGACATTCTTTTTTGCTGGCCATGAAACCACTGCATTGTTACTTACATGGACAGTTATGTTGTTAGCATCAAATCCCTCTTGGCAACAAAAAGTTAGAGATGAACTTAAAAGCATATGTAATGGTTCTGGAATTCCCTCCCTGGATCAACTCTCCAAGCTCACTCTTTTGCATATGGTAATAAATGAGTCAATGAGGCTTTATCCGCCAGCATTAGTGCTACCAAGAATGGCATTTGAAGATATATTATTGGGTGACCTTTATATCCCTAAAGGCTTATCAATTTGGATCCCTGTGTTGGCCATTCACCACAGTGAAAAATTATGGGGCAAAGATGCAAATGAGTTTAATCCAGAGAGGTTTACTTCAAAGTCATATACCCCTGGTCGTTTTTTACCATTTGCTTCTGGCCCTAGAAATTGTGTTGGGCAAGCATTTGCATTAATGGAAGCTAAGATCATATTAGCTATGTTAATCTCTCGCTATAGCTTCACCATTTCTGAAAATTACCTTCATGCCCCTGTGGTTGTCCTCACTATCAAGCCCAAGTATGGAGTTCAAGTTTGTTTGAAGCCCTTGGAGACATGA 1545 0.4291 MAMVVVTLLLLGTLMVSLLLKVAYETISCYWLTPLRIKKIMEMQGVRGPKPRFFSGNILDMASLISKTTSNDMKTINHDIVGRLLPHFLLWSSQYGKRFVYWNGTEPRLCIAETELIREFLSKCSTVSGRSWHQRQGSKHFIGGGLLMANGQDWYHQRHIVAPAFGGDRLKGYAGHMVECTKEMLQSLQNALDSGRTEVEIGEYMTKLTADIISRTEFGTSYQKGKKIFHLLKVLQTRCAQASRHLCFPGSRYFPSKYNREIKSLKMEVEKLLMEIIQSRKDCVEIGRSESYGNDLLGMLLNEMEKKNSLDLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPSWQQKVRDELKSICNGSGIPSLDQLSKLTLLHMVINESMRLYPPALVLPRMAFEDILLGDLYIPKGLSIWIPVLAIHHSEKLWGKDANEFNPERFTSKSYTPGRFLPFASGPRNCVGQAFALMEAKIILAMLISRYSFTISENYLHAPVVVLTIKPKYGVQVCLKPLET* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4153 514 Coils Coil 262 282 - -
Amo14g4153 514 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 508 - -
Amo14g4153 514 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 Pfam Cytochrome P450 93 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 SUPERFAMILY Cytochrome P450 48 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 Gene3D Cytochrome P450 31 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo14g4153 514 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4153 Amo-Chr14 147238960 147242844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4153 3 374 Cytochrome P450 AT5G38450 65.782 1.38e-172 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4153 K10717 - gmx:100808392 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g4153 14 147238960 147242844 Amo14g4153 14 147238960 147242844 ECH