Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4143 ATGTTCACCTCAAGGAAGAAAATCCACAAGGATAATGATGCTGAACCCACTGAGTTTGAGGAGACAGCTGCACAGTACTTGTTTGATTTGGAGAACACTAATCAGGACCTGAAAAGTGATTTGAAAGATCTCTACATAAACCAGGCAATTCAAATGGACGTGGCTGGGAATCGCAAGGCTGTGGTCATCTATGTTCCTTTCAGATTGAGGAAATCGTTCCGCAAGATTCATCTTCGTCTTGTCAGGGAGCTTGAGAAGAAGTTTAGTGGGAAGGAAGTTGTGTTGATCGCCACAAGAAGGATCGTGCGTCCTCCAAAGAAAGGATCTGCTGTTCAGCGGCCCCGTACCCGCACTTTGACTGCTGTGCATGATGCTATTCTTGAAGACGTAGTTTATCCTGCCGAGATTGTTGGCAAACGAGTCAGATACAGACTCGATGGATCAAAAATAATCAAAGTTTTCTTGGATCCGAAGGAACGCAACAACACCGAATACAAGCTGGAGACTTTCTCTGGAGTTTACAGGAAGCTTACCGGAAAAGATGTATCTTTTGAGTTTCCAATCGCAGAAGCCTAG 576 0.4462 MFTSRKKIHKDNDAEPTEFEETAAQYLFDLENTNQDLKSDLKDLYINQAIQMDVAGNRKAVVIYVPFRLRKSFRKIHLRLVRELEKKFSGKEVVLIATRRIVRPPKKGSAVQRPRTRTLTAVHDAILEDVVYPAEIVGKRVRYRLDGSKIIKVFLDPKERNNTEYKLETFSGVYRKLTGKDVSFEFPIAEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4143 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Amo14g4143 191 Coils Coil 27 47 - -
Amo14g4143 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Amo14g4143 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Amo14g4143 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4143 Amo-Chr14 147170881 147172826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4143 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.010 5.85e-113 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4143 K02993 - gmx:100500684 359.377