Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4132 ATGGCTGAAGTTGTTGAATACCATGCAAATTCCAACACAAACACCCCTACCACCCCACCATCTTTGAAGCTCTTTGGCATCAACATTCATCACAAGATCTCAAATAAAGATCAAAACACTACTACTACTACTACTCATAAAAAAGAACAACCATGTTTGATGAATCAATCACCATCACCACCACAGAAATCTGAACAAGATAATTGTTCTTTTGATGACCCTTTTAATAACTCATCACCATCATCATCAAGGGATGCAAGAAAATATGAGTGCCAGTATTGTTGTAGAGAGTTTGCAAATTCACAAGCACTTGGTGGGCACCAAAATGCACACAAGAAAGAGAGGCAGCTCCTGAAACGTGCTCAAATGCAAGCTGCACGTGGCTTTGTTGCTTCACACTTTCAAAGCACAATCATGTCATCATCACAGGTGCCACATCTTCTAGCTGTTGGTGGTGGTGCCGGTGTGCCGCCGCCACAACCTTCTTCTCAGGCATCTTCATGGTTCTATTATACAAGTGGTGGTGGCACACCCACCAGCTTTGGTGATAATGCATACCATTCAGGAGGAGCCATGGCTCCCCCTGTAATATCGGCGACGGCAACACCGCCGGCGACGGAGATAACAGCGCACTTCTGTTCTCCTCTGCCGCCTTCTTCCGCTCTGCTTCTTCCAACCTTCACAATCCGTTCACCTCTGCCTCTTTGCCTCTGCTTCCCTCGCTGTAATATATCGATGTTGCATGCAGCATCGCCTGCCCCTGGCTTTTGTTTGAGCTGTCCCAGGAACCTTCATTGTCCTCGTGATTCAACAAAGGCTTTGGTTAGAGTGAGGTTTTCGGTTCGCTCGGTACCAGAGTCAAAGAATGGAGCTACTAAAGTGGAGTATACTCCTTGGCTTGTTGTAGGCCTGGGTAACCCTGGAAGTAAATACCATGGAACTAGGCACAATGTGGGATTTGAAGTAATCGATAACATTTCTAAAGCAGAAGGGATTCGGATGAACACAATACAGTCTAAGGCATTGATTGGAATAGGTTCTATAGGAGATGTACCAATTTTGCTTGCAAAGCCTCAAACATACATGAACTTTAGTGGTGAATCGGTTTATGATGAAATGAGTCTTCCAAATGGTGTTTTAAGGCTTCAACCTAAAGGAGGACATGGTTACCACAATGGGTAA 1182 0.4492 MAEVVEYHANSNTNTPTTPPSLKLFGINIHHKISNKDQNTTTTTTHKKEQPCLMNQSPSPPQKSEQDNCSFDDPFNNSSPSSSRDARKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVASHFQSTIMSSSQVPHLLAVGGGAGVPPPQPSSQASSWFYYTSGGGTPTSFGDNAYHSGGAMAPPVISATATPPATEITAHFCSPLPPSSALLLPTFTIRSPLPLCLCFPRCNISMLHAASPAPGFCLSCPRNLHCPRDSTKALVRVRFSVRSVPESKNGATKVEYTPWLVVGLGNPGSKYHGTRHNVGFEVIDNISKAEGIRMNTIQSKALIGIGSIGDVPILLAKPQTYMNFSGESVYDEMSLPNGVLRLQPKGGHGYHNG* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4132 393 MobiDBLite consensus disorder prediction 1 84 - -
Amo14g4132 393 Gene3D - 284 393 IPR036416 GO:0004045
Amo14g4132 393 SUPERFAMILY beta-beta-alpha zinc fingers 86 116 IPR036236 -
Amo14g4132 393 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Amo14g4132 393 Pfam Peptidyl-tRNA hydrolase 300 393 IPR001328 GO:0004045
Amo14g4132 393 PANTHER PEPTIDYL-TRNA HYDROLASE 266 393 IPR001328 GO:0004045
Amo14g4132 393 Gene3D Classic Zinc Finger 66 139 - -
Amo14g4132 393 MobiDBLite consensus disorder prediction 7 22 - -
Amo14g4132 393 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 311 324 IPR018171 GO:0004045
Amo14g4132 393 PANTHER CHLOROPLASTIC GROUP IIB INTRON SPLICING FACILITATOR CRS2-B, CHLOROPLASTIC 266 393 - -
Amo14g4132 393 SUPERFAMILY Peptidyl-tRNA hydrolase-like 297 393 IPR036416 GO:0004045
Amo14g4132 393 MobiDBLite consensus disorder prediction 32 84 - -
Amo14g4132 393 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4132 Amo-Chr14 147062553 147084673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4132 17 149 C2H2 Transcription Factor Family AT1G67030 44.203 2.83e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4132 K01056 - aip:107638204 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g4132 14 147062553 147084673 Amo14g4132 14 147062553 147084673 ECH