Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4126 ATGGCATACCTGAAATCAAGATCCAAAAATGACATTATTAGTTTGTGCATGCTTCTGCTTTGCTTGGGTTGTGTTGAGTCCAACGATGGTGAAGGTGCATACATGTTGAAGCTTATGAATGCACTCAAACCCCCTGGCTGGTCCAACAAGAAGCCAGTTTGCCAGTGGACTGGGGTGTATTGCGACTATCAAAGTGGAAGGATTGAAGAGATCGATCTCAGTTCAAAGTCGCTGACGGGAACAGTTCCTGCAGGCCTCAACGACTCCCTCTCCCAACTCACAGAACTCGATCTCTCCCAGAATAATCTGAGTGGTCCTGTTCCCTCTCTCGCCAACCTCTCCTTCCTCCAATACGTATACCTCGGCTACAACAACTTCACCTCCATTCCTCATGGTTGCTTCCATGGTCTTACTAGTTTGCAGATCTTGAGATTGAGAAACAATATCAACCTCCCACCATGGAACTTTCCTACCGATTTGACTGCTCACTCCTCCCAACTCCGTTCCCTCTACCTCTCTTCTACGAATCTCATGGCCTCCTTACCAAACATATCCCATTCCTTCCCAACTCTGCGATATCTTGATCTCTCTAACAACAACCTCTCCTCCATCCCTGAGGGTTGCTTCCACAATCTAACCAGTTTCCGTGGCCTCTCTTTGGCCAACAATACCAACCTCCTACCATGGACCTTCCCCCTCTACTTGACTCGTTCCTCATTGCAACTCTCCTACCTCTTACTCGAGGCTACGAATCTTATGGGATCCCTACCGAACTTGTCTCATTTCTTCCCCAACTTGATTACTGTTTCTCTATCCAACAACCACCTTACCTCCATCCCCCAAGGTTGCTTTCAGGGTCTACCCTATTTGAGGCAGCTGAAGTTGGGAAACAACACCAACCTCGCACCATGGACCTTCCCAAACTTGACTCAGTCCACAGGACTGGAAGAGCTCAATCTTGTTGCTACAAATGTCATGGGCCCTCTACCAGAAATATTTGACTCCTTGACAAGTTTGGAGACTGTTGTTCTCTCCAACAACAGCCTCACTGGTGTCTTGCCGGAGTCTTTTGGAAGGTCCAAGATTGCCACCTTGCATCTCAACAACCAGAAGGATGAGGGGTTGTCAGGTCCAATTGATGTCCTCTCAAACATGCTCGACTTATCTCAAGTGTGGCTTCAGGGGAACTCGTTTACAGGACCTATTCCTGACATGTCTCGTTGCACTGCTTTACAAGATTTACAACTTGCCCACAATCAATTAACAGGTGTGGTCCCAGATTCTCTCATCGTTCTTCCAAAGTTAGAAGATTTTTATTTGGACTATAACTTTTTGCAAGGTCCTCTACCAAATATTATTACCTTCAGTCTTTTTGAAACGTCGAATCTAGGTGTTAACACCACAAATGGTTTCTGTCACAAAGATCCAGGACCTTGTGATCACAAAGTGACCATTTTGCTTGAAATTGCTGCGAAATTCAAGTATCCAATTCTGTTGGCACGTTCATGGAGAGGAAATAATGCCTGTAAAAACTGGAGTTTCATTACATGTGATGACAAAAATAAGATTAGAATGGTCAATTTATCAAATCTAAAATTGACGGGCACAATCTCACCTGTATTTGCCAATTTAACTAATTTGCGGGAATTGTATTTGGATGGGAATAATTTGACGGGTGAAATACCTGAAGGATTGACAACATTGCATGAACTTGAGGTTGTGAATGTCTCTAACAATCACCTTGCTGGAAATATTCCCAAATTCTCACCAAAGGTCAACTTTATTGCCACAGGCAATGATTTTCTTGTGCTTCCTTCTAATGGTTCCGACCATACACCAAGGCCAATCCCAACTGCTTTGATTACAGTTATATCGATAGCTAGTGCTGGAGTTATTATGATCCTTGTTCTGGTTATTTACAACCGCAAGAGGTGTCTTAATTTAATCTATGGGATTATCTTCAAGACAACATACAATGATCACCACATTGAGGATTTTATAAAAGGTTATGAATTTTTGGCACCAAAGCGATTTAGTTATTCCGAAGTGAAAAGAATGACAAATTTATTTCGTGATAAACTAGGACAAGGTGGATATGGCACCGTATACAAAGCACGTTTAACTAATGGTCGTCAAGTTGCAGTGAAGATATTAACTGAGTCTAAGGGAAATGGAGAAGAATTCATAAATGAAGTTGCTAGTATTAGTAGGACATCTCATGTGAATATTGTCTCACTCTTAGGATTTTGTTATGATCAAGGCAAAAGAGCACTTATTTATGAATTCATGTCTAATGGTTCTCTAGATAGATACATCTACAAAGCAGAATCTTCTAAGGCTTTTTGTAGTTTGGATTGGAGTATTTTGCATAACATTGCAATTGGTATTGCTCAAGGGTTAGAATACTTGCATCAAGGATGCACAACAAAAATTTTGCATCTTGATATAAAACCTGAAAATATTCTTCTAGATGAACATTTCTGTCCAAAAATCTCAGATTTTGGACTAGCTCGAATCTGTCAAAAGAAAGAGAGTAATGTATCTATTTTAGGCACAAGAGGAACTCCAGGTTACATTGCACCAGAAATCTTTAGTCGAGCATATGGTAGAATTTCTGATAAATCTGATGTATATAGTTATGGTATGTTGATTCTTGAGATGTTCGGAAAAAGAAACAACTTCAACAATAAAGAATCACATCGCAGTGAAATGTATTTTCCTGACTGGATATATGAGGATCTTGACCAAGGTAATATTTTTGGTAGACATTCCGATATCTCAGATGAAGATAATGATATGATAAAGAAGATTATATTAGTAAGTTTGTGGTGTATTCAACCAAATCCATCACATAGGCCATCAATGAATAAAGTTGTAGAAATGTTACATGGAGAACTTGAGTCTGTGCCATTTCCTCCAAAGCCTGTGATGTATTCTCCTGAAAGGTCTCTGTTAAAAACTTTAGATATATCTTCCGGTAGTAAACTTGAGACAATTTCAATAACTACAGAGGAGAGTAGTTTCACACGAGATCAATAA 3039 0.4038 MAYLKSRSKNDIISLCMLLLCLGCVESNDGEGAYMLKLMNALKPPGWSNKKPVCQWTGVYCDYQSGRIEEIDLSSKSLTGTVPAGLNDSLSQLTELDLSQNNLSGPVPSLANLSFLQYVYLGYNNFTSIPHGCFHGLTSLQILRLRNNINLPPWNFPTDLTAHSSQLRSLYLSSTNLMASLPNISHSFPTLRYLDLSNNNLSSIPEGCFHNLTSFRGLSLANNTNLLPWTFPLYLTRSSLQLSYLLLEATNLMGSLPNLSHFFPNLITVSLSNNHLTSIPQGCFQGLPYLRQLKLGNNTNLAPWTFPNLTQSTGLEELNLVATNVMGPLPEIFDSLTSLETVVLSNNSLTGVLPESFGRSKIATLHLNNQKDEGLSGPIDVLSNMLDLSQVWLQGNSFTGPIPDMSRCTALQDLQLAHNQLTGVVPDSLIVLPKLEDFYLDYNFLQGPLPNIITFSLFETSNLGVNTTNGFCHKDPGPCDHKVTILLEIAAKFKYPILLARSWRGNNACKNWSFITCDDKNKIRMVNLSNLKLTGTISPVFANLTNLRELYLDGNNLTGEIPEGLTTLHELEVVNVSNNHLAGNIPKFSPKVNFIATGNDFLVLPSNGSDHTPRPIPTALITVISIASAGVIMILVLVIYNRKRCLNLIYGIIFKTTYNDHHIEDFIKGYEFLAPKRFSYSEVKRMTNLFRDKLGQGGYGTVYKARLTNGRQVAVKILTESKGNGEEFINEVASISRTSHVNIVSLLGFCYDQGKRALIYEFMSNGSLDRYIYKAESSKAFCSLDWSILHNIAIGIAQGLEYLHQGCTTKILHLDIKPENILLDEHFCPKISDFGLARICQKKESNVSILGTRGTPGYIAPEIFSRAYGRISDKSDVYSYGMLILEMFGKRNNFNNKESHRSEMYFPDWIYEDLDQGNIFGRHSDISDEDNDMIKKIILVSLWCIQPNPSHRPSMNKVVEMLHGELESVPFPPKPVMYSPERSLLKTLDISSGSKLETISITTEESSFTRDQ* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4126 1012 ProSiteProfiles Protein kinase domain profile. 688 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4126 1012 SMART serkin_6 688 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4126 1012 Pfam Leucine Rich Repeat 546 565 IPR001611 GO:0005515
Amo14g4126 1012 SMART LRR_sd22_2 90 115 - -
Amo14g4126 1012 SMART LRR_sd22_2 188 220 - -
Amo14g4126 1012 SMART LRR_sd22_2 544 567 - -
Amo14g4126 1012 ProSiteProfiles Leucine-rich repeat profile. 265 286 IPR001611 GO:0005515
Amo14g4126 1012 SUPERFAMILY L domain-like 314 479 - -
Amo14g4126 1012 Pfam Leucine rich repeat N-terminal domain 485 518 IPR013210 -
Amo14g4126 1012 Pfam Leucine rich repeat N-terminal domain 31 62 IPR013210 -
Amo14g4126 1012 CDD STKc_IRAK 694 962 - -
Amo14g4126 1012 PANTHER RECEPTOR-LIKE KINASE TMK4 17 202 - -
Amo14g4126 1012 PANTHER RECEPTOR-LIKE KINASE TMK4 199 277 - -
Amo14g4126 1012 PANTHER RECEPTOR-LIKE KINASE TMK4 242 963 - -
Amo14g4126 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Amo14g4126 1012 Gene3D Phosphorylase Kinase; domain 1 664 762 - -
Amo14g4126 1012 Gene3D Ribonuclease Inhibitor 234 466 IPR032675 -
Amo14g4126 1012 Gene3D Ribonuclease Inhibitor 29 233 IPR032675 -
Amo14g4126 1012 ProSiteProfiles Leucine-rich repeat profile. 92 114 IPR001611 GO:0005515
Amo14g4126 1012 SUPERFAMILY L domain-like 52 369 - -
Amo14g4126 1012 ProSiteProfiles Leucine-rich repeat profile. 190 211 IPR001611 GO:0005515
Amo14g4126 1012 Pfam Leucine rich repeat 264 298 IPR001611 GO:0005515
Amo14g4126 1012 Pfam Leucine rich repeat 111 148 IPR001611 GO:0005515
Amo14g4126 1012 Pfam Leucine rich repeat 165 223 IPR001611 GO:0005515
Amo14g4126 1012 ProSitePatterns Protein kinases ATP-binding region signature. 694 716 IPR017441 GO:0005524
Amo14g4126 1012 PANTHER OSJNBA0070M12.3 PROTEIN 17 202 - -
Amo14g4126 1012 PANTHER OSJNBA0070M12.3 PROTEIN 242 963 - -
Amo14g4126 1012 PANTHER OSJNBA0070M12.3 PROTEIN 199 277 - -
Amo14g4126 1012 SUPERFAMILY Protein kinase-like (PK-like) 670 962 IPR011009 -
Amo14g4126 1012 SMART LRR_typ_2 336 359 IPR003591 -
Amo14g4126 1012 SMART LRR_typ_2 544 568 IPR003591 -
Amo14g4126 1012 SMART LRR_typ_2 90 112 IPR003591 -
Amo14g4126 1012 SMART LRR_typ_2 263 286 IPR003591 -
Amo14g4126 1012 SMART LRR_typ_2 188 211 IPR003591 -
Amo14g4126 1012 SMART LRR_typ_2 113 136 IPR003591 -
Amo14g4126 1012 Gene3D Transferase(Phosphotransferase) domain 1 763 969 - -
Amo14g4126 1012 SUPERFAMILY L domain-like 483 588 - -
Amo14g4126 1012 Pfam Protein kinase domain 692 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4126 1012 Gene3D Ribonuclease Inhibitor 481 603 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4126 Amo-Chr14 147003877 147007864 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4126 656 991 Receptor kinase-like Gene Family AT5G38280 55.882 1.85e-124 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo14g4126 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4126 - - aip:107637472 1618.21