Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4118 ATGGCTCCCAGAATAATATTAAAATCTGAAGTTGGTTTTACCAATTTTGCTATAGTCATCTTCTTCTTGTTCATCTTGTGCGTCCACTCCGATTTGCAAGAAGCTCGAGATCCAGAAGCTGGCTACTTGTGGAAGCTTCTGAAAGCTCTGAAGCCAGCTCCCTCCAACTGGTCCGAAGACACATATGTCTGCAATTGGAATGGCGTAGAGTGCAGTAAGGAGGGCAAAGTCTACGCTCTTAAACTCTCTTCAATGTCCCTCACCGGCACAATCCCTTCAGATCTCAACAACACCCTCACCCAACTCAACCATCTTCTTCTAGACAACAACTCTCTCTCGGGGCCTCTTCCCTCTCTCGCCGGCCTCTCCACGCTCACAGAGGTTCAACTCGACAACAACAACTTCACCTCCATCCCTCATCATTGCTTTCAGGGTCTTTCCAGTTTGGAAACCCTCACTCTAAGTAACAACATCAACCTCCCACCCTGGAGTTTCCCTCTTGATTTGCTTCAGTCTTCCTCCAAACTCCAAGGCCTCCGACTGGACGCTACAAATCTTATTGGCACCTTACCGGAAGACATATGCACTTCCTTCCCAAGCTTGTACTCTCTTTTCCTCTCTAACAACAAGCTCACTGGTCCCCTGCCTCATTTTTCCAATTGCACCAACTTGGGTTATCTGGATCTTCAAGATAACTTGTTAACTGGTTTAGTTCCACCTTCCTTGATGAATCTCTCCATGATTTCAGTCCATTTGGAGAGAAACTATTTTCAGGGTCCATTGCCTGTGTTTCAATCCTCTTTTACTGATGTCAACACCAGCAATAATGGGTTCTGTTTAGACCATGCAGGGCCTTGTGATAAGCAAGTCACCACTTTGCTTCAAATTGCTGCGGATTTTGGGTATCCTCTCTTGTTGGCGAGATCTTGGCGAGGAAACAATCCATGTCAAAACTGGAGTTTTGTTGTGTGCGTAGAGAACAAGATCAGAACCCTGAATTTGACCAAACAGAATTTGACAGGGACCATTTCTCCGGCATTTACAAACTTAACTGATTTGAGGGAGTTGTATCTCAGTGGAAATAATTTGAGCGGTCCAATACCAGAGAGCTTAACAGATCTACCTCAACTTAAGATTCTTGATGTTTCCAATAACAATCTGTCAGGGAACATACCCCATTTCTCACCTGATGTCACTCTCAATACTAAGGGTAATGTTCTGCTCATCAATGCTTCTCAGCCAACCACAGTTGCTCCATCTAAAGCTCCATTCTCACTTTCCTTGATTGCAGGCTTATCAGCAGCCAGTGTTGGAATTTTGATAACATGTGTGGTGGTTATTTACAAAAGCAAGAGGTTACAGAAAATCATGTTCAAGAAAACAATTGTTGATCGCAATGTTGAGGATTTGATACAAAGTTATGGGTTTATGGTGCAAAAACGATATAGTTATTCGCAGGTGAAAAGGATGACCAATTTCTTTGGTGAGAAATTAGGACAAGGAGGATTTGGTGTTGTATATAAAGGAAGTTTAAGTGACGGTCGTCACGTAGCAGTGAAGATATTGAAAGAGTCTAAAGGGAATGGAGAAGAATTTAATGGAGAAGAATTCATAAACGAGGTGGCAAGTATTAATAGCACGTCTCATGTGAATATTGTCCCATTTTTAGGATTTTGTTATGAGACAAATAAGAGAGCTTTGATTTATGAATTCATGCCAAATGGTTCTTTAGATAAATTTATTGATGAAAAAGCATCAAAATTGGATTGGAGCAGACTCTATCAAATTATAATTGGCATTGCTCGAGGATTAGAATATTTACATTGGGGATGTAGTACCAAGATTTTACATCTTGATATTAAACCTCAAAATATTCTTTTGGATGTAGATTTTTGTCCTAAAATTGCTGACTTTGGATTAGCTAAAATATGCACAAAGAAGGAGAGTATTGTATCTCTACAGTATGCAAGAGGAACAGTGGGATATGTTGCACCAGAAGTATATAATCAGATATACAGTGGAGTTTCTCGAGTTTCTCACAAATCTGATGTGTATAGTTATGGGAAGTTAATTCTTGAAGTAATTGGAGGAAAAGAGAATTATAATGATAAAGATACACGTACTAGTGAAATATACTTTACAGAATGGATTTACAAGGAACTGGAGCAAGATAATCTTTCAACAAGATGCTTGACAAACACAGAGAATGAAAATGATTTGGTAAAGAAGATTATTTTAGTAGGCATGTGGTGTATACAAAGAAATCCATCGGATAGACCGTCCATGAAAAGAGTGATAGAAATGTTAGAAGGACTACTTGATTCTATCCCATTTCCTCCGAAGCCAATGTGGTATTCTCCTCAAGGATCAAATTACCGAAAATGTATTTTTAAAGTTATAGGTGTTCTTTCAATATATATAGGTGCAACAGCAGCTGGTGTTGGAATTGTTGTAGTCTTTGCTGTGGTCATTTGCAACCGCAAGAGATACTTCAGTTTAGCACAAAAGAGGTTAATCTTTGGAAAAACAGGGGAATCTGATGACCAGAATGTGGAGGATTTCATCACAACTTATGGCTTTCTGGCCCCAAAGAGATATAGTTTTTCAGAAGTGAAGAAAATCACAAACTCATTTTGTGATCAATTAGGCAAAGGGGGATATGGTGTTGTGTACAAAGGGAAGTTATCTGATGGTCGTCTTGTTGCAGTGAAAGTGATAAATGAATCAAAAGGGAGTGGAGAAGAATTCATAAACGAGGTTGCTAGTATTAGTAGAACATCTCATGTGAACATTGTCTCGCTTTTGGGATTTTGCAATGAGAGAAACAAAAGAGCACTCATTTATGAGTTCATGTCTAATAGCTCATTGGATAAGTTCATTTATGGAAATGGATCTCCAACTCCCACTTGCAATTTGGATTGGAACACATTGTATCAAATTGCAATTGGCATCGCTCGTGGACTAGAATATTTGCATCGAGGATGCGGTACAAGAATTTTACATCTTGATATTAAACCTCAAAATATTCTCTTGGATGAAGATTTTTGTCCTAAAATTTCTGATTTTGGATTATCCAAGATATGTCAAAAGAAAGAGAGTATTGTGTCCATATTGGGAACAAGAGGAACTATTGGATATATTGCACCTGAAGTATTTAGTCGCATGTATGGTGGCATTTCGCACAAATCTGATGTATATAGTTATGGCATGTTAATTCTTGAAATGGTTGGAGGAAGAAAGAACTACGAAAGTGGAGGGTCAAATTCCAGCGAGATGTACTTTCCAGATTGGATTTACAAAGATCTTGAGCAAGGTAACATACCATCTCATATTCACTCACTTGTGACAGAAGAAGAAAATGATCTGATAAAAAAAACTACTTTAGTGAGCTTATGGTGCATTCAAACAAATCCATCAGATAGACCATCAATAAATAAAATAGTAGAAATGCTAGAAGGACAATTGCACTCAATACCATTTCCTCCTAAGCCTTTCTTGTATTCTACTTCAAGTCTACCCTTACAAATTTCACATATATCTTCTAGCAACATGGATGATCAGTCCAATTCAATAACCACGAATCCAAAATTATTATTGGCTTTTATACTCTAG 3612 0.3857 MAPRIILKSEVGFTNFAIVIFFLFILCVHSDLQEARDPEAGYLWKLLKALKPAPSNWSEDTYVCNWNGVECSKEGKVYALKLSSMSLTGTIPSDLNNTLTQLNHLLLDNNSLSGPLPSLAGLSTLTEVQLDNNNFTSIPHHCFQGLSSLETLTLSNNINLPPWSFPLDLLQSSSKLQGLRLDATNLIGTLPEDICTSFPSLYSLFLSNNKLTGPLPHFSNCTNLGYLDLQDNLLTGLVPPSLMNLSMISVHLERNYFQGPLPVFQSSFTDVNTSNNGFCLDHAGPCDKQVTTLLQIAADFGYPLLLARSWRGNNPCQNWSFVVCVENKIRTLNLTKQNLTGTISPAFTNLTDLRELYLSGNNLSGPIPESLTDLPQLKILDVSNNNLSGNIPHFSPDVTLNTKGNVLLINASQPTTVAPSKAPFSLSLIAGLSAASVGILITCVVVIYKSKRLQKIMFKKTIVDRNVEDLIQSYGFMVQKRYSYSQVKRMTNFFGEKLGQGGFGVVYKGSLSDGRHVAVKILKESKGNGEEFNGEEFINEVASINSTSHVNIVPFLGFCYETNKRALIYEFMPNGSLDKFIDEKASKLDWSRLYQIIIGIARGLEYLHWGCSTKILHLDIKPQNILLDVDFCPKIADFGLAKICTKKESIVSLQYARGTVGYVAPEVYNQIYSGVSRVSHKSDVYSYGKLILEVIGGKENYNDKDTRTSEIYFTEWIYKELEQDNLSTRCLTNTENENDLVKKIILVGMWCIQRNPSDRPSMKRVIEMLEGLLDSIPFPPKPMWYSPQGSNYRKCIFKVIGVLSIYIGATAAGVGIVVVFAVVICNRKRYFSLAQKRLIFGKTGESDDQNVEDFITTYGFLAPKRYSFSEVKKITNSFCDQLGKGGYGVVYKGKLSDGRLVAVKVINESKGSGEEFINEVASISRTSHVNIVSLLGFCNERNKRALIYEFMSNSSLDKFIYGNGSPTPTCNLDWNTLYQIAIGIARGLEYLHRGCGTRILHLDIKPQNILLDEDFCPKISDFGLSKICQKKESIVSILGTRGTIGYIAPEVFSRMYGGISHKSDVYSYGMLILEMVGGRKNYESGGSNSSEMYFPDWIYKDLEQGNIPSHIHSLVTEEENDLIKKTTLVSLWCIQTNPSDRPSINKIVEMLEGQLHSIPFPPKPFLYSTSSLPLQISHISSSNMDDQSNSITTNPKLLLAFIL* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4118 1203 Pfam Leucine rich repeat 328 387 IPR001611 GO:0005515
Amo14g4118 1203 Pfam Leucine rich repeat 124 159 IPR001611 GO:0005515
Amo14g4118 1203 Gene3D Ribonuclease Inhibitor 42 282 IPR032675 -
Amo14g4118 1203 SUPERFAMILY Protein kinase-like (PK-like) 472 770 IPR011009 -
Amo14g4118 1203 Gene3D Ribonuclease Inhibitor 287 411 IPR032675 -
Amo14g4118 1203 Pfam Protein kinase domain 496 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4118 1203 Pfam Protein kinase domain 880 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4118 1203 SMART serkin_6 876 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4118 1203 SMART serkin_6 492 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4118 1203 PANTHER TYROSINE KINASE FAMILY PROTEIN 37 787 - -
Amo14g4118 1203 PANTHER TYROSINE KINASE FAMILY PROTEIN 803 1192 - -
Amo14g4118 1203 SMART LRR_typ_2 198 220 IPR003591 -
Amo14g4118 1203 SMART LRR_typ_2 146 167 IPR003591 -
Amo14g4118 1203 SMART LRR_typ_2 350 373 IPR003591 -
Amo14g4118 1203 SMART LRR_typ_2 374 401 IPR003591 -
Amo14g4118 1203 SMART LRR_typ_2 122 145 IPR003591 -
Amo14g4118 1203 PANTHER RUST RESISTANCE KINASE LR10-RELATED 803 1192 IPR045874 GO:0004672
Amo14g4118 1203 PANTHER RUST RESISTANCE KINASE LR10-RELATED 37 787 IPR045874 GO:0004672
Amo14g4118 1203 SUPERFAMILY RNI-like 80 389 - -
Amo14g4118 1203 Gene3D Phosphorylase Kinase; domain 1 850 950 - -
Amo14g4118 1203 Gene3D Phosphorylase Kinase; domain 1 467 571 - -
Amo14g4118 1203 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Amo14g4118 1203 SUPERFAMILY Protein kinase-like (PK-like) 855 1152 IPR011009 -
Amo14g4118 1203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 999 1011 IPR008271 GO:0004672|GO:0006468
Amo14g4118 1203 ProSiteProfiles Protein kinase domain profile. 492 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4118 1203 ProSiteProfiles Protein kinase domain profile. 876 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4118 1203 Gene3D Transferase(Phosphotransferase) domain 1 951 1158 - -
Amo14g4118 1203 Gene3D Transferase(Phosphotransferase) domain 1 572 776 - -
Amo14g4118 1203 ProSitePatterns Protein kinases ATP-binding region signature. 882 904 IPR017441 GO:0005524
Amo14g4118 1203 Pfam Leucine rich repeat N-terminal domain 287 324 IPR013210 -
Amo14g4118 1203 Pfam Leucine rich repeat N-terminal domain 39 72 IPR013210 -
Amo14g4118 1203 CDD STKc_IRAK 498 772 - -
Amo14g4118 1203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4118 Amo-Chr14 146921893 146937712 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4118 421 788 Receptor kinase-like Gene Family AT5G38280 53.209 3.97e-118 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo14g4118 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4118 - - aip:107635703 1408.66