Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4117 ATGTTGAAGCTTATGAATGCACTCAAACCCCCTGGCTGGTCCAACACCACCCACATGTGCCACTGGACTGGCGTGAGTTGCAACAATCAAAGTAGAAGGATTGAAGAGATCTTTCTCAAAGAAATGTCACTGACGGGAACAGTTCCTGCAGGCCTCAACGACTCCCTCTCCCAACTCACATACCTCTATCTCTCCTACAATAACCTGGGTGGGCCTGTTCCCTCTCTCGCCAACCTCTCTTTCCTCCAAGTAGCGTACCTCGACAACAACAACTTCACCATCATCCCTCATGGTTGCTTCCATGGTCTTACTAGTTTGCAGTCCTTGCTCCTGAATAACAACACCAACCTCCCACCATGGAACTTTCCTACGGATTTGACTGCTCACTCCTCTCAACTCGATGTCCTCGATCTCTCTTCTACAAATCTCATGGGATCCGTACCCAACATATCCCATTCCTTCCCAACTCTGCGATATCTTTCTCTCTCTAACAACAACCTCTCCTCCATCCCTGAGGATTGCTTCCACAACCTAACCAGTTTGGACGTCCTCTCTTTGGCCAACAACACCAACCTCCTACCATGGACCTTCCCCCTCGATTTGACTCATTCCTCATTCAAACTCTCCTACCTCGACCTCCAGGCTACAAATCTCATGGGATTCCTACCAAACTTATCACATTTCTTCCCCGACTTGATTACCGTTTCTCTCTCCAACAACCACCTTACCTTCATCCCCCAAGGTTGCTTCCAGGCTCTACCCTATTTGGGGCTGCTGAAGTTGGGAAACAACACCAACCTCACACCATGGACCTTCCCCGACTTGATTCAGTCCACAAAAATACAAGAGCTCAATCTTGTTGCTACAAATGTCATGGGCTCTCTACCAGAAATATTTGACTCCTTGACAAGTTTGGAGACTCTTCTTCTCTCCAACAACAGCCTCACTGGTGTCTTGCCTGAGTCTTTTGGAAGGTCCAAGATTACCACATTGCACCTCAACGACCAGAAGGGCAAAGGATTTTCAGGTACAATGGATGTTGTTTCAAATATGATCGATTTGTCTGAGGCGTGGCTTCAGGGGAACTCATTTGATGGATATATCCTTGACATGTCTCGTTGTACTGCCTTACAAGATTTACGACTTGCGCACAATCGATTTACAGGTGTGGTTCCAGATTCTCTGATAAATCTCAGTCGCAAGAACCTGCAAACTGTTATTTTGAACAACAACTTTTTTCAGGGTCCTATGCCTAACATTTTAGGAGATTCTGACAGTACGAATGTTGGAGATAACACCACCAATGCCTTTTGTCGAGACGACTATGATCCTTGTGACGAGAGAGTTACCATTTTGCTTGAAATTGCATCTGCATTTGGATATCCTTATTTGTTGGCCCGTTCATGGCGAGGAAATAATCCATGTCATAATTGGAGTTTTGTTGCATGTACTGCGACTATGATTACAACCGTGAATTTCACAAGGCAGAATTTGACAGGAACTATCTCAGATGCATTTGGTAAATTAACTCATTTGGAAAACTTGTATCTGAGTGGTAACAATTTAAACGGTTCAATACCTGAAAACTTCACATCTCTTCATCAACTCAAGAATCTCGATGTCTCCAACAACAACTTATCAGGAAAAATTCCCAATTTCTCACGTGGAGTATACCTGAATACTGAAGGTAACCCTTCGTTTGAGAGAAGAAAACCTTCGGGCAAGAGAAGAAATCCACCTGCTTGGATCAAAGGCGCAATAGCAGCAGCAGCAGGTATTGGAGGTCTTGTTTTCTTGGTTATAATAATTTGTAACCGAAAGAGGTGTCTTAGCTTGTTACAAAGGATTTTGTGGAAGAAAACAGGACCATTTATTGATAATGAATTTGAAGAATTTATGAAAACTTATGGATCTTTGATGTTAAGGAGATATAATTATTCTGAAGTGAAAAGTATGACAAACTCATTTCGTGATAAATTAGGAAAGGGAGGATATGGCATTGTATACAAAGCATATTTAAGTGATGGTTGTCTGGTAGCAGTGAAGGTATTGACCGAATCTAGCGGAAGTGGAGAGGAATTCCTGAATGAGGTAGCTAGTATTGGTAGAACTTCTCATATGAACATTGTCTCGCTTTTGGGATTTTGCTATGAAAAATATAAAAGGGCACTCATCTATGAATTCATGCCTAATGGTTCTTTGGATAAGTTTATCTACAAACAAGAATCTCCCAATGCTATTTGTAATTTGGATTGGAATACATTGTTTCAAATTACAATTGGTATTGCAGGAGGATTAGAATATTTGCACCGAGGATGTGCTACAAGAATTTTACATCTTGATATTAAACCTCAAAATATTCTGTTAGATGAAGATTTTTGTCCAAAAATTGCTGATTTTGGATTGGCAAAAATATGCAAAAAGAAAGAAAGTATTGTATCTTTACAAGGTACAAGAGGAACTCCGGGATACATTGCACCAGAAGTATTTAGCCGAACTTTTGGTAAAGTTTCTCACAAATCTGATGTGTATAGTTATGGAATGTTGATTCTTGAATTGGTGGGAGGTAGAAAGAACTACGACACCGGCGGATCACTTACCAGTGAAATGTACTTTCCAGATTGGATTTACAAGGATCTCGAGGAGCAAAATATCCTCGGACGGGGTTTGTCCACTACAGAAGAAGAAAGTGATATGATAAAGAAAATTACTTTGGTGAGTTTATGGTGCATTCAAACAAATCCATCGGATAGACCATCAATAAACAAAGCAGTAGAAATGTTAGAAGGACCACTTCAGTCAGTGCCATATCCTCCAAAACCTGTCTTATATTCTCCTCAAATGTCTATCTCACAGTTTTCACGAATCTCCTATAACAGTACATATGAGGAGGATTCTGAGATTGTTGAGGAGACTATTTCCATCAATAAAATGAGTTCAAAATTTGCAAAGTAA 2955 0.4091 MLKLMNALKPPGWSNTTHMCHWTGVSCNNQSRRIEEIFLKEMSLTGTVPAGLNDSLSQLTYLYLSYNNLGGPVPSLANLSFLQVAYLDNNNFTIIPHGCFHGLTSLQSLLLNNNTNLPPWNFPTDLTAHSSQLDVLDLSSTNLMGSVPNISHSFPTLRYLSLSNNNLSSIPEDCFHNLTSLDVLSLANNTNLLPWTFPLDLTHSSFKLSYLDLQATNLMGFLPNLSHFFPDLITVSLSNNHLTFIPQGCFQALPYLGLLKLGNNTNLTPWTFPDLIQSTKIQELNLVATNVMGSLPEIFDSLTSLETLLLSNNSLTGVLPESFGRSKITTLHLNDQKGKGFSGTMDVVSNMIDLSEAWLQGNSFDGYILDMSRCTALQDLRLAHNRFTGVVPDSLINLSRKNLQTVILNNNFFQGPMPNILGDSDSTNVGDNTTNAFCRDDYDPCDERVTILLEIASAFGYPYLLARSWRGNNPCHNWSFVACTATMITTVNFTRQNLTGTISDAFGKLTHLENLYLSGNNLNGSIPENFTSLHQLKNLDVSNNNLSGKIPNFSRGVYLNTEGNPSFERRKPSGKRRNPPAWIKGAIAAAAGIGGLVFLVIIICNRKRCLSLLQRILWKKTGPFIDNEFEEFMKTYGSLMLRRYNYSEVKSMTNSFRDKLGKGGYGIVYKAYLSDGCLVAVKVLTESSGSGEEFLNEVASIGRTSHMNIVSLLGFCYEKYKRALIYEFMPNGSLDKFIYKQESPNAICNLDWNTLFQITIGIAGGLEYLHRGCATRILHLDIKPQNILLDEDFCPKIADFGLAKICKKKESIVSLQGTRGTPGYIAPEVFSRTFGKVSHKSDVYSYGMLILELVGGRKNYDTGGSLTSEMYFPDWIYKDLEEQNILGRGLSTTEEESDMIKKITLVSLWCIQTNPSDRPSINKAVEMLEGPLQSVPYPPKPVLYSPQMSISQFSRISYNSTYEEDSEIVEETISINKMSSKFAK* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4117 984 Gene3D Transferase(Phosphotransferase) domain 1 729 935 - -
Amo14g4117 984 PANTHER RECEPTOR-LIKE KINASE TMK4 162 243 - -
Amo14g4117 984 Pfam Leucine rich repeat 489 546 IPR001611 GO:0005515
Amo14g4117 984 Pfam Leucine rich repeat 132 189 IPR001611 GO:0005515
Amo14g4117 984 Gene3D Ribonuclease Inhibitor 115 194 IPR032675 -
Amo14g4117 984 SUPERFAMILY L domain-like 17 335 - -
Amo14g4117 984 SMART LRR_typ_2 533 556 IPR003591 -
Amo14g4117 984 SMART LRR_typ_2 79 102 IPR003591 -
Amo14g4117 984 SMART LRR_typ_2 302 325 IPR003591 -
Amo14g4117 984 SMART LRR_typ_2 154 177 IPR003591 -
Amo14g4117 984 SMART LRR_typ_2 374 397 IPR003591 -
Amo14g4117 984 SMART LRR_typ_2 229 252 IPR003591 -
Amo14g4117 984 SMART LRR_typ_2 509 532 IPR003591 -
Amo14g4117 984 Pfam Leucine Rich Repeat 304 324 IPR001611 GO:0005515
Amo14g4117 984 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Amo14g4117 984 ProSiteProfiles Leucine-rich repeat profile. 156 177 IPR001611 GO:0005515
Amo14g4117 984 PANTHER OSJNBA0070M12.3 PROTEIN 207 929 - -
Amo14g4117 984 ProSiteProfiles Protein kinase domain profile. 654 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4117 984 PANTHER RECEPTOR-LIKE KINASE TMK4 1 168 - -
Amo14g4117 984 Gene3D Ribonuclease Inhibitor 195 443 IPR032675 -
Amo14g4117 984 Pfam Leucine rich repeat N-terminal domain 10 28 IPR013210 -
Amo14g4117 984 Pfam Leucine rich repeat N-terminal domain 450 483 IPR013210 -
Amo14g4117 984 SUPERFAMILY Protein kinase-like (PK-like) 633 928 IPR011009 -
Amo14g4117 984 Gene3D Phosphorylase Kinase; domain 1 627 728 - -
Amo14g4117 984 SMART LRR_sd22_2 56 81 - -
Amo14g4117 984 SMART LRR_sd22_2 509 532 - -
Amo14g4117 984 SMART LRR_sd22_2 533 555 - -
Amo14g4117 984 SUPERFAMILY L domain-like 449 553 - -
Amo14g4117 984 CDD STKc_IRAK 660 930 - -
Amo14g4117 984 PANTHER RECEPTOR-LIKE KINASE TMK4 207 929 - -
Amo14g4117 984 PANTHER OSJNBA0070M12.3 PROTEIN 162 243 - -
Amo14g4117 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Amo14g4117 984 SMART serkin_6 654 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4117 984 SMART LRR_bac_2 154 173 - -
Amo14g4117 984 SMART LRR_bac_2 509 529 - -
Amo14g4117 984 SMART LRR_bac_2 533 553 - -
Amo14g4117 984 SMART LRR_bac_2 302 322 - -
Amo14g4117 984 SMART LRR_bac_2 56 76 - -
Amo14g4117 984 Pfam Protein kinase domain 658 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4117 984 ProSitePatterns Protein kinases ATP-binding region signature. 660 682 IPR017441 GO:0005524
Amo14g4117 984 Gene3D Ribonuclease Inhibitor 2 102 IPR032675 -
Amo14g4117 984 Gene3D Ribonuclease Inhibitor 447 571 IPR032675 -
Amo14g4117 984 PANTHER OSJNBA0070M12.3 PROTEIN 1 168 - -
Amo14g4117 984 SUPERFAMILY L domain-like 343 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4117 Amo-Chr14 146918779 146921842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4117 640 950 Receptor kinase-like Gene Family AT5G38280 60.000 3.08e-125 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo14g4117 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4117 - - aip:107635702 1904.41