Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4116 ATGTTGAAGCTTATGAATGCACTCAAACCCCCTGCCTGGTCCAACACGAAGCCCGTGTGCGACTGGATAGGCGTGGCTTGCAACAATCAAAGTGGAAGGATTGAACAGATCTTTATCAATTCAATGTCACTGACGGGAACAGTTCCTGCAGGCCTCAACGACTCCCTCTCCCAACTCACATATCTCGATCTCTCCGACAATAATCTGAGTGGGCCTGTTCCCTCTCTCGCCAACCTCTCTTTCCTCCAAGTAGCGTACCTCGACAACAACAACTTCACCACCATCCCTCATGGTTGCTTCCATGGTCTTACTAGTTTGCGGCACTTGAGCTTGAATAACAACACCAACCTCCCACCATGGAACTTTCCTACCGATTTGACTGCTCACTCCTCCCATCTCCATACCCTCGACCTGTCTTCTACAAATCTCAAAGGCTCCTTACCACCAAACATATCCCATTCCTTCCCAGTTATGGAGTATCTTTATCTCTCTAACAACAACCTCTCCTCCATTCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGACTAGTCTCCAGTTGGCCAACAACACCAACCTCTCACCATGGACCTTCCCCCTCGATTTGACTCATTCCTCATTGCAACTCTACCACCTCGACCTCGAGGCTACAAATCTCATGGGATCCCTACCATACTTGTCTCATTTCTTCCCACATTTGAACCTAGTCTCACTCTCTAACAACAACCTCTCCTCCATCCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGAATGTCCTCTCTTTGGCCAACAACACCAACCTCAGACCATGGACCTTCCCCGACTTGATTCAGTCCACAAAAATACAAGAGCTCAATCTTGTTGCTACAAATCTCATGGGCTCTCTACCAGAAATATTTGACTCATTGCCAAGTTTGGAGACTCTTCTGCTCTCCAACAACAGCCTCACCGGTGTCTTGCCTGAGTCTTTTGGAAGACCCAATAAGATTACCACATTGCACCTCAACGACCAGAAGGGCAAAGGATTTTCAGGTACAATGGATGTCCTTTCAAATATGATCGATTTGTCTGAGGCGTGGCTTCAGGGGAACTCCTTTGATGGATATATCCCTGACATGTCTCGTTGTACCGCTTTACAAGATTTACGACTTGCGCACAATCGATTTACAGGTGTCATTCCACATTCTCTGATAAATCTCAGGAACCTGCAAACTGTTACTTTGAACAACAACTTTTTTCAGGGCCCTATGCCTATCTTTTCCGTAATTACCGAGAGTACGAATGTTGGAGATAACACCACCGATGCCTTTTGTCGAGACAACTTTGATCCTTGTGACGAGAGAGTTACCATTTTGCTTGAAATTGCATCTGCATTTGGATATCCTTATTTGTTGGCCAGTTCATGGCGAGGAAATAATCCATGTCATAATTGGAGTTTTGTTGCATGTACTGCGACTATGATTACAACCGTGAATTTGACAAGGCAGAATTTGACAGGAACTATCTCGGGTGCGTTTGGTAAATTAACTCATTTGGAAAACTTGTATCTGAGTGGTAACAATTTAAAAGGTTCAATACCTGAAAACTTGACCACTCTTCATCAGCTCAAGAATCTCGATGTCTCCCACAACAACTTATCAGGAAAAATTCCCCATTTCTCACGTGGAGTATACCTGAATACTGAAGGTAACCCTTTGTTCAAGAGAAATCCACCTGCTTGGATCAAAGGCGCAATAGCAGCAGCAGCAGGTATTGGAGGTCTTGTTTCCTTGGTTATAGTTATTTGTAACCGAAAGAGGTGTCTTAGCTTCTTACAATGGATTTTGTGGAAGAAAACAGGACCATTTATTGATAATGAATTTGAAGAATTTATGAAAATTTATGGATCTTTGATGTTAAGGAGATATAGTTATTCTGAAGTGAAAAGCATGACAAACTCATTTCGTGATAAATTAGGAAGAGGAGGATATGGCATTGTATACAAAGCATGCTTAAGTGATGGTTGTCCAGTAGCAGTGAAGGTGTTGACCGAATCTAGCGGAAGTGGGGAGGAATTCCTGAATGAGGTAGCTAGTATTGGTAGAACTTCTCATATGAATATTGTCTCGCTGTTGGGATTTTGCTATGAAAAATATAAAAGGGCACTCATCTATGAATTCATGCCAAATGGTTCTTTGGATAAGTTTATCTATAAACAAGAATCTCCCAATGCTATTTGTATTTTGGATTGGAATACATTATTTCAAATTACAATTGGTATTGCACGAGGATTAGAATATTTGCACCGAGGATGTGCGACAAAAATTTTGCATCTTGATATTAAACCTCAAAATATTCTGTTAGATGAAGATTTTTGTCCAAAAATTGCTGATTTTGGATTGGCAAAAATATGCAAAAAGAAAGAGAGTATTGTATCTATACAAGGTACAAGAGGAACTCCTGGATACATTGCACCAGAAGTATTTAGCCGAACCTTTGGTAAAGTTTCTCACAAATCTGATGTGTATAGTTATGGAATGTTGATTCTTGAATTGGTGGGAGGTAGAAAGAACTACGACACCGGCGGATCACTTACCAATGAAATGTACTTTCCAGATTGGATTTACAAGGATCTCGAAGAGCAAAATATCCTTGGACGGGGTTTGTCCACTACTGAAGAAGAAAATGATATGATAAAGAAAATTACTTTGGTGAGTTTATGGTGCATTCAAACAAATCCATTGGATAGACCATCAATAAACAAAGTAGTAGAAATGTTAGAAGGACCACTTCAGTCAGTGCCATATCCTCCAAAACCTGTCTTATATTCTCCTCAAATGTCTATCTCACAGTTTTCACGAATCTCCTATAACAGTACAGATGAGGAGGATTCTGAGATTGTTGAGGAGACTATTTCCATCAATAATTCAAAATTTGCAAAATAA 2925 0.4116 MLKLMNALKPPAWSNTKPVCDWIGVACNNQSGRIEQIFINSMSLTGTVPAGLNDSLSQLTYLDLSDNNLSGPVPSLANLSFLQVAYLDNNNFTTIPHGCFHGLTSLRHLSLNNNTNLPPWNFPTDLTAHSSHLHTLDLSSTNLKGSLPPNISHSFPVMEYLYLSNNNLSSIPEGCFHNLTSLTSLQLANNTNLSPWTFPLDLTHSSLQLYHLDLEATNLMGSLPYLSHFFPHLNLVSLSNNNLSSIPEGCFHNLTSLNVLSLANNTNLRPWTFPDLIQSTKIQELNLVATNLMGSLPEIFDSLPSLETLLLSNNSLTGVLPESFGRPNKITTLHLNDQKGKGFSGTMDVLSNMIDLSEAWLQGNSFDGYIPDMSRCTALQDLRLAHNRFTGVIPHSLINLRNLQTVTLNNNFFQGPMPIFSVITESTNVGDNTTDAFCRDNFDPCDERVTILLEIASAFGYPYLLASSWRGNNPCHNWSFVACTATMITTVNLTRQNLTGTISGAFGKLTHLENLYLSGNNLKGSIPENLTTLHQLKNLDVSHNNLSGKIPHFSRGVYLNTEGNPLFKRNPPAWIKGAIAAAAGIGGLVSLVIVICNRKRCLSFLQWILWKKTGPFIDNEFEEFMKIYGSLMLRRYSYSEVKSMTNSFRDKLGRGGYGIVYKACLSDGCPVAVKVLTESSGSGEEFLNEVASIGRTSHMNIVSLLGFCYEKYKRALIYEFMPNGSLDKFIYKQESPNAICILDWNTLFQITIGIARGLEYLHRGCATKILHLDIKPQNILLDEDFCPKIADFGLAKICKKKESIVSIQGTRGTPGYIAPEVFSRTFGKVSHKSDVYSYGMLILELVGGRKNYDTGGSLTNEMYFPDWIYKDLEEQNILGRGLSTTEEENDMIKKITLVSLWCIQTNPLDRPSINKVVEMLEGPLQSVPYPPKPVLYSPQMSISQFSRISYNSTDEEDSEIVEETISINNSKFAK* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4116 974 SMART serkin_6 646 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4116 974 PANTHER OSJNBA0070M12.3 PROTEIN 158 243 - -
Amo14g4116 974 CDD STKc_IRAK 652 922 - -
Amo14g4116 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Amo14g4116 974 ProSiteProfiles Leucine-rich repeat profile. 232 253 IPR001611 GO:0005515
Amo14g4116 974 Pfam Leucine rich repeat N-terminal domain 6 28 IPR013210 -
Amo14g4116 974 Pfam Leucine rich repeat N-terminal domain 450 483 IPR013210 -
Amo14g4116 974 SMART LRR_sd22_2 509 532 - -
Amo14g4116 974 SMART LRR_sd22_2 56 81 - -
Amo14g4116 974 SMART LRR_sd22_2 533 561 - -
Amo14g4116 974 SUPERFAMILY L domain-like 348 568 - -
Amo14g4116 974 ProSiteProfiles Leucine-rich repeat profile. 157 178 IPR001611 GO:0005515
Amo14g4116 974 PANTHER RECEPTOR-LIKE KINASE TMK4 208 921 - -
Amo14g4116 974 PANTHER RECEPTOR-LIKE KINASE TMK4 1 168 - -
Amo14g4116 974 PANTHER RECEPTOR-LIKE KINASE TMK4 158 243 - -
Amo14g4116 974 Gene3D Ribonuclease Inhibitor 198 441 IPR032675 -
Amo14g4116 974 Pfam Protein kinase domain 650 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4116 974 PRINTS Leucine-rich repeat signature 59 72 - -
Amo14g4116 974 PRINTS Leucine-rich repeat signature 303 316 - -
Amo14g4116 974 ProSitePatterns Protein kinases ATP-binding region signature. 652 674 IPR017441 GO:0005524
Amo14g4116 974 SUPERFAMILY Protein kinase-like (PK-like) 625 920 IPR011009 -
Amo14g4116 974 Gene3D Ribonuclease Inhibitor 447 570 IPR032675 -
Amo14g4116 974 Gene3D Ribonuclease Inhibitor 2 102 IPR032675 -
Amo14g4116 974 SUPERFAMILY L domain-like 18 336 - -
Amo14g4116 974 PANTHER OSJNBA0070M12.3 PROTEIN 208 921 - -
Amo14g4116 974 PANTHER OSJNBA0070M12.3 PROTEIN 1 168 - -
Amo14g4116 974 ProSiteProfiles Leucine-rich repeat profile. 58 80 IPR001611 GO:0005515
Amo14g4116 974 Pfam Leucine rich repeat 131 190 IPR001611 GO:0005515
Amo14g4116 974 Pfam Leucine rich repeat 57 114 IPR001611 GO:0005515
Amo14g4116 974 Pfam Leucine rich repeat 489 546 IPR001611 GO:0005515
Amo14g4116 974 Pfam Leucine rich repeat 281 336 IPR001611 GO:0005515
Amo14g4116 974 ProSiteProfiles Leucine-rich repeat profile. 511 534 IPR001611 GO:0005515
Amo14g4116 974 SMART LRR_bac_2 230 249 - -
Amo14g4116 974 SMART LRR_bac_2 303 323 - -
Amo14g4116 974 SMART LRR_bac_2 509 529 - -
Amo14g4116 974 SMART LRR_bac_2 155 174 - -
Amo14g4116 974 SMART LRR_bac_2 533 553 - -
Amo14g4116 974 SMART LRR_bac_2 56 76 - -
Amo14g4116 974 Gene3D Phosphorylase Kinase; domain 1 619 720 - -
Amo14g4116 974 ProSiteProfiles Protein kinase domain profile. 646 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4116 974 Gene3D Transferase(Phosphotransferase) domain 1 721 927 - -
Amo14g4116 974 SMART LRR_typ_2 103 124 IPR003591 -
Amo14g4116 974 SMART LRR_typ_2 509 533 IPR003591 -
Amo14g4116 974 SMART LRR_typ_2 230 253 IPR003591 -
Amo14g4116 974 SMART LRR_typ_2 79 102 IPR003591 -
Amo14g4116 974 SMART LRR_typ_2 254 275 IPR003591 -
Amo14g4116 974 SMART LRR_typ_2 303 326 IPR003591 -
Amo14g4116 974 SMART LRR_typ_2 179 200 IPR003591 -
Amo14g4116 974 SMART LRR_typ_2 155 178 IPR003591 -
Amo14g4116 974 SMART LRR_typ_2 56 78 IPR003591 -
Amo14g4116 974 Gene3D Ribonuclease Inhibitor 115 197 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4116 Amo-Chr14 146911735 146914852 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4116 632 942 Receptor kinase-like Gene Family AT5G38280 60.000 2.67e-125 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo14g4116 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4116 - - aip:107635702 1695.63