Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4112 ATGGCTTCTCTGCTTGTTATGCTTCTCCCTCACTTAATGATCCTCTTGATAATGATTCAGATTCCTCCATACTTAAGCTCCAATGATGATAACTATACAAGTTGTGCTGATACTCGCTATGATTGTGGGAAGATTAACAACATTGGTTTTCCATTCTGGGGAGGAAATCGTCCAAAGCAGTGTGGCCACCCTCTTCTACAACTCAACTGTGATCCTGATCATGACTCCACTACTTACATAACCATCAAGAACATGAGATACCGGGTTTTGCAAGCATACCCGGAAAACCAAACCATGAAGATAGCAAGAGTTGACTACTTTGAAGGTCTATGCCCTTCAAAAGCAGTAAACACAAGCCTTGACTTTGAGCTCTTTGATTATGGGCCTGGCAATAAGAATCTTACCCTCTTCTATCATTGTTCTTTAAATAATGGATTGTCCAATTCCATCCCCGGATTTCTTAATTGTTTCTCAAATAGAACTTCAGATGAATACTTTTATGCTAGGCCTGAAGCTCTAGGTGCTCCTCCTTCTAGTGTTGTTTGCACAACAAGTGTGTTTATTCCATTGTTGTTGCAATTTGATGTTAAAGTGGAGTTGACATGGAACAACATAGAAGGTGCTATCCAAAATGGATTCTTGGTGAAATGGATAGGAAGTGTAGCAGAATGTTTCAAGTGTATGAACACAGGTGGAGCCTGTGGCTATGATTTGAATTCAAATCAACCAACATGTTATTGCAAAGATCAGTCTGGCTATTCATATTTGGATGATGGGCACATCAAAATCTGTGATGCTTCTGCCACCTCACCAACTCAAGATGATCTTGGACGTTCAGGGAAAAGTACTAACAAAGCAGCTATTGCAGCAGGTGCTACCTCAGGAGCTGTAGTCTTTGTTGTCCTTCTTATAGGTACACTTTTTGTGATAAGAAGAAGGAGAAGAAATGCTGAAAGATCAAGAAGCAACAAGGATATTTTGCCTTTGAGTGGAGTCCCTCTTACATCTTCAACTACAAGTAGTAGTAACACATCTCAGAGTGTTTCTTCTTACCCTTCCTCCAAGTCAGATTCTGTGCCAAAGAGTTACTACTATGGTGTTCAAGTGTTTGACTATGCTGAACTTGAAGAAGCTACCAACAATTTTGACCCTTCTAGAGAACTTGGCGAGGGAGGCTTTGGCACTGTTTACAAAGGTATGCTTCAAGATGGGCGTGTAGTTGCAGTGAAACGCCACTATGAAAGCCATTTAAAGCGTGTTGAGCAGTATATGAATGAAGTTGAGCTTCTAGCACACTTGAGGCACAAGAATTTGGTCACACTCTTTGGCTGCACTTCAAGACACAGCAGAGAACTCATCCTTGTTTATGAGTTCATACCTAATGGAACACTAGCCGATCACCTCCATGGAAGCCTTGCAAATTCCACCTTACTTACTTGGAATGTAAGATACAAAGTTGCACTCGAAACAGCCGAGGCGCTTTCCTACCTTCATTCTAAGAAAGTCATACACAGAGATGTTAAGTCCACAAACATTCTGCTGACAGAGACTTTTCAAGTTAAGGTTGGTGATTTTGGACTATCAAGGTTGTTTCCTAAATTTGTTACTCATGTCTCAACAGCGCCACAAGGCACACCTGGCTATGTTGATCCGGAGTATTACCAGAACTACCAATTGACCGATAAGAGTGATGTTTATAGCTTTGGGGTGGTGTTAGTTGAGCTTATATCTTCACTGCAAGCAGTGGACATAACCCGGAACCGGAATGAAGTTAACTTGGCTAGTCTTGCAGTGAATAGGATACAGAACCAAGAATTGCATGACATGGTTGATCCATGTCTTGGATTTGAGAAGGACAATGATGTAAGGAGGATGGTAACTGCTGTTGCTGAATTGGCATTTAGGTGCTTGCAGCAGCAGAGAGATATGAGGCCCTCCATGGATGAGGTTCTTGAGATCTTGAGAGGGGTAAAGGGTGATGAGTTTGGTGCATTAGAGAGAAACTCATCAGAGTCAGCGGTGGGTGTTAACCATAATAAGACAGAGGAGGTTATACTTTTGAAGAAGGTTCTACCACCAGTTTCACCAGATTCTGTTGCTGATAAATGGCAGTGGGACATGCTAAGAAGAACTTCTTAA 2139 0.4165 MASLLVMLLPHLMILLIMIQIPPYLSSNDDNYTSCADTRYDCGKINNIGFPFWGGNRPKQCGHPLLQLNCDPDHDSTTYITIKNMRYRVLQAYPENQTMKIARVDYFEGLCPSKAVNTSLDFELFDYGPGNKNLTLFYHCSLNNGLSNSIPGFLNCFSNRTSDEYFYARPEALGAPPSSVVCTTSVFIPLLLQFDVKVELTWNNIEGAIQNGFLVKWIGSVAECFKCMNTGGACGYDLNSNQPTCYCKDQSGYSYLDDGHIKICDASATSPTQDDLGRSGKSTNKAAIAAGATSGAVVFVVLLIGTLFVIRRRRRNAERSRSNKDILPLSGVPLTSSTTSSSNTSQSVSSYPSSKSDSVPKSYYYGVQVFDYAELEEATNNFDPSRELGEGGFGTVYKGMLQDGRVVAVKRHYESHLKRVEQYMNEVELLAHLRHKNLVTLFGCTSRHSRELILVYEFIPNGTLADHLHGSLANSTLLTWNVRYKVALETAEALSYLHSKKVIHRDVKSTNILLTETFQVKVGDFGLSRLFPKFVTHVSTAPQGTPGYVDPEYYQNYQLTDKSDVYSFGVVLVELISSLQAVDITRNRNEVNLASLAVNRIQNQELHDMVDPCLGFEKDNDVRRMVTAVAELAFRCLQQQRDMRPSMDEVLEILRGVKGDEFGALERNSSESAVGVNHNKTEEVILLKKVLPPVSPDSVADKWQWDMLRRTS* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4112 712 ProSiteProfiles Protein kinase domain profile. 382 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4112 712 Pfam Wall-associated receptor kinase C-terminal 178 250 IPR032872 -
Amo14g4112 712 MobiDBLite consensus disorder prediction 329 359 - -
Amo14g4112 712 Gene3D Phosphorylase Kinase; domain 1 353 458 - -
Amo14g4112 712 MobiDBLite consensus disorder prediction 319 359 - -
Amo14g4112 712 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 703 IPR044652 -
Amo14g4112 712 SUPERFAMILY Protein kinase-like (PK-like) 355 654 IPR011009 -
Amo14g4112 712 Gene3D Transferase(Phosphotransferase) domain 1 459 663 - -
Amo14g4112 712 SMART serkin_6 382 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4112 712 PANTHER - 10 703 - -
Amo14g4112 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Amo14g4112 712 Pfam Wall-associated receptor kinase galacturonan-binding 35 103 IPR025287 GO:0030247
Amo14g4112 712 Pfam Protein kinase domain 385 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g4112 712 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4112 Amo-Chr14 146886471 146898385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4112 33 703 Receptor kinase-like Gene Family AT1G25390 39.035 5.61e-141 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo14g4112 Pkinase 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4112 - - aip:107635700 1352.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g4112 14 146886471 146898385 Amo14g4112 14 146886471 146898385 ECH