Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4071 ATGGCCTCAAAACATGTTGGACATGCAATAGGGATCGATCTTGGTACAAAGTACTCGTGTGTTGCTGTATGGGATGATAAAAATGGTGGTGCCAAGATCATTCATAATGAACAAGGCAACAGAACCACACCTTCTTGTGTTGCTTTCACTGACTCACACAGATTGGTTGGTGATGCTGCCAAAAATCAGGCACCATTCAACCCAAAAAACACTATCTTTGATGCTAAGAGGTTGATTGGTAGGAAATTCAGTGATTCCATTATTCAAGCTGATTTGAATCTCTGGCCATTCAAAGTTGTAGCTGGTGTTAATGACAAGCCCATGATTTCTGTTGAATACAAAGGTGAAGAAAAGCTTCTTGCTGCTGAAGAAATCTCATCTATGATCCTAACAAAGATGAAGGAGATTGCAGAGGCTTTTCTTGAATCACCTGTGAAGAATGCTGTGATTACTGTCCCTGCTTATTTCAATGACTCTCAGCGAAAAGCTACACAAGATGCCGGCGCCATTGCCGGCCTCAATGTCATGAAGATCATCAATGAGCCTACTGCTGCAGCTCTTGCCTATGGCCTTCAGAAGAGAGGAAACTGTTCCGGAGAGCGAAATGTTTTCGTCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTTGTTACCATTAAAGATGATGTCTATGAAGTTAAGGCTACCACCGGAGACACTCATCTCGGAGGGGAAGATTTTGATAACAGAATGATAGATTTCTTTGTGAAAGACTTCAATAAGAAGAACAAAGTTGACATTAGTGAGAATCCAAGGTCTCTTAGGAGGTTAAGAACTGCATGTGAGAGGGCTAAAATGAATCTTTCATTTGTTAAAGAAACAACAATTGAGGTTGATTCTTTGTTCCAAGGCATTGATTTTTGCTCATTGATGACTCGTTCAAAGTTTGAGGAACTCAACAAGGACTTATTTGTGAAGTGTATGGACACTGTTGAGAAGTGTCTTGCTGATGCTAAAGTAGACAAGAACAGTGTTCATGATGTTGTTCTTGTTGGTGGATCTTCAAGGATTCCTAAACTGCAGAATCTTTTGCAAGATTTCTTTCTAGGAAAAGATCTTTGCAAGAGCATTAACCCGGATGAAGCAGTTGCTTATGGTGCTGCGGTTCAAGCTGCTTTATTGGCTGAAAACTTAAACATTGCACTGGATTTGGTTCTGTTAGATGTGACTCCTCTTTCTCTTGGTATTTCAATAAAAGGAGACATAATGTGTGTATTTATTCCAAGAAATTCTATGATTCCTACTAAGCATGACAAACTCTTTGGTACTTTCGAAGATAACCAATCCACGGCGAAGATAGCTGTTTATGAAGGGGAGAGAACAAGGGCTAGTGACAACAACTTGCTGGGATTGTTTTGTTTATCTGATCTTGATCCTTCTCCGCGACGCCACCCTATAAAAGTGTGCTTTGATTTGGATGAGAATGGTGTTCTAAAAGTGTATGCTGAGGAATCAAAGACAGGGAAGAAGAAAGAGATTACTATAGTGAATGAGAAAGGGAGACTTACAGCACAAGAAATCAAGAGAATGATTCAAGAAGCTGAGATGTATAAGGATGATGATGAGAAGTTTAAGGAAAAGGTTGAGGCTAAGATTGCTTTGGAGGAATATGTGTACAAGATGAGTGCTTTTATGGAAGATGCTAAGGTTAGTTCGAAGATTAAATCATCACAGAAGAAGATTATAGAGGCTGCAATTGGAGAGGCTAGAGAGCTTCTTGATAGTAACCAGCAGAAGGTTGAAACTGCTGATTTTGAGAACTGTCTTCATAAGCTTAGGAGCATTTTTGATCCAATAATAGTGTGA 1848 0.3972 MASKHVGHAIGIDLGTKYSCVAVWDDKNGGAKIIHNEQGNRTTPSCVAFTDSHRLVGDAAKNQAPFNPKNTIFDAKRLIGRKFSDSIIQADLNLWPFKVVAGVNDKPMISVEYKGEEKLLAAEEISSMILTKMKEIAEAFLESPVKNAVITVPAYFNDSQRKATQDAGAIAGLNVMKIINEPTAAALAYGLQKRGNCSGERNVFVFDLGGGTFDVSLVTIKDDVYEVKATTGDTHLGGEDFDNRMIDFFVKDFNKKNKVDISENPRSLRRLRTACERAKMNLSFVKETTIEVDSLFQGIDFCSLMTRSKFEELNKDLFVKCMDTVEKCLADAKVDKNSVHDVVLVGGSSRIPKLQNLLQDFFLGKDLCKSINPDEAVAYGAAVQAALLAENLNIALDLVLLDVTPLSLGISIKGDIMCVFIPRNSMIPTKHDKLFGTFEDNQSTAKIAVYEGERTRASDNNLLGLFCLSDLDPSPRRHPIKVCFDLDENGVLKVYAEESKTGKKKEITIVNEKGRLTAQEIKRMIQEAEMYKDDDEKFKEKVEAKIALEEYVYKMSAFMEDAKVSSKIKSSQKKIIEAAIGEARELLDSNQQKVETADFENCLHKLRSIFDPIIV* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4071 615 SUPERFAMILY Actin-like ATPase domain 199 388 IPR043129 -
Amo14g4071 615 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Amo14g4071 615 PRINTS 70kDa heat shock protein signature 8 21 - -
Amo14g4071 615 PRINTS 70kDa heat shock protein signature 38 50 - -
Amo14g4071 615 PRINTS 70kDa heat shock protein signature 60 68 - -
Amo14g4071 615 PRINTS 70kDa heat shock protein signature 148 168 - -
Amo14g4071 615 PRINTS 70kDa heat shock protein signature 211 221 - -
Amo14g4071 615 PRINTS 70kDa heat shock protein signature 339 355 - -
Amo14g4071 615 PRINTS 70kDa heat shock protein signature 371 391 - -
Amo14g4071 615 PRINTS 70kDa heat shock protein signature 397 416 - -
Amo14g4071 615 PRINTS 70kDa heat shock protein signature 477 493 - -
Amo14g4071 615 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 395 545 IPR029047 -
Amo14g4071 615 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Amo14g4071 615 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 614 IPR029048 -
Amo14g4071 615 PANTHER HEAT SHOCK 70 KDA PROTEIN 6 613 - -
Amo14g4071 615 PANTHER HEAT SHOCK PROTEIN 70KDA 6 613 IPR013126 GO:0005524|GO:0140662
Amo14g4071 615 Pfam Hsp70 protein 9 608 IPR013126 GO:0005524|GO:0140662
Amo14g4071 615 Gene3D - 194 368 - -
Amo14g4071 615 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 549 IPR029047 -
Amo14g4071 615 Gene3D - 546 615 IPR029048 -
Amo14g4071 615 Gene3D - 10 386 - -
Amo14g4071 615 Gene3D Actin; Chain A, domain 4 237 320 - -
Amo14g4071 615 Gene3D - 73 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4071 Amo-Chr14 146593677 146595640 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4071 1 614 Calmodulin-binding Proteins AT3G12580 64.935 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4071 K03283 - gmx:102667578 793.497