Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4062 ATGGCCAAAAAATGTGAGGGACATGCAGTGGGAATAGACCTTGGAACAACATATTCTTGTGTTGCAGTGTGGAAGGAACAACATTCTCGAGCTGAGGTCATACCCAATGACCAAGGCAACAGGACAACTCCTTCTTACGTTGCTTTCACTCATAATCAAAGGTTGATTGGTGATGCTGCTAAGAACCAAGCTGCTATCAACTCTACCAACACTGTCTTTGATGCTAAGAGGATGATTGGTAGGAAATTTGCTGACCCCAATATTCAGAAAGATAAAGTATTGTGGCCATTCAAAGTCATTTCTGGTGCTAATGGCGAACCCATTGTTGTTGTTAAGTACAAGGGTCAGGAGAGACGCCTTTGTCCTGAGGAAATTTCAGCCATGATTCTTACAAAGATGCGTGAGACTGCAGAAGCATATTTAGGTTCACCTGTGGAGAATGCAGTTATTACTGTACCGGCCTACTTCAGTGACTCGCAGCGCAAAGCCACCAGAGATGCTGGTGCCATTGCTGGTCTCACTGTCATGAGGTTAATCAATGAACCTACTGCTGCAGCTATTGCTTATGGCCTTGATAAGGGAGCTGGTAACTGTTCTGCAGAGAGGAATGCTTTGATCTTCGACCTTGGAGGTGGTACTTTTGATGTAACCCTCCTTACCATCAAGGATAAGTTGTTTGAAGTTAAGGCCTCTGGTGGAAACACTCATCTTGGTGGAGAAGATTTTGATGACAGAATGTTGAACTACTTCATAGAGGAGTTCGAGAAGAAGAACAAAGTTGACATAAGTGGTGATTCAAGAGCATTGAGGAGGTTGAGAAACGAATGCGAAAGGGCGAAAAGAACACTCTCAAGCTCCATTGATGCGGTCATTGACATAGATGGTTTATTTAAGGGTATTGACTTCTCTTCATCAATTACTCAAGCTAAGTTTGAGGAACTCAACAAGGACCTCTTTGAAGAGTGTATTGAGATAGTAAAAGAATGTGTTACCAATGCTGGTGTAGACAAGAGTTGTATACATGAGGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCAAAAGTACAACAACTACTGCAGGAATTCTTCCAAGGGAAAAATCTGTGCAAGGCACTTAATCCTGATGAAGCTGTTGCTTATGGAGCCGCCCTTCAGGCTGCTTTGTTAAGTGAAGGCTTTAAGAATGCTCCAAATGTGGTGATGTGCGATGTTACTCCGTTGTCACTTGGTATATGTGAAAAAGTAGATATTATGAGCATAGAAATTCCTAGGAATTCTAGTATTCCTATAAAGAAGAAAACTAAATACGGCACAGTTGTGGAAAACCAATCTTTTGCACGTGTTTTGGTTTATGAAGGTGAGAGGGCAAGAGCTAGTGATAACAACTTGCTGGGCCGATTTGTGCATTCTGGTATTCCTCCTGCTCCTCGAGGCCATCCTATTATGATATGCTTCAATATAGACGAAGATGGTATCTTAAATGTATCTGCTGAAGAAGAAACCACTGGTAAAAGCAACGAGATTACCATAACCAATGATAAAGGGCGAATGTCGGCTAAGGAAATTGCAAGATTAATTCAAGAAGCTAAAATTTATGAGGCTGAAGACAGAATTTCTTGA 1620 0.4173 MAKKCEGHAVGIDLGTTYSCVAVWKEQHSRAEVIPNDQGNRTTPSYVAFTHNQRLIGDAAKNQAAINSTNTVFDAKRMIGRKFADPNIQKDKVLWPFKVISGANGEPIVVVKYKGQERRLCPEEISAMILTKMRETAEAYLGSPVENAVITVPAYFSDSQRKATRDAGAIAGLTVMRLINEPTAAAIAYGLDKGAGNCSAERNALIFDLGGGTFDVTLLTIKDKLFEVKASGGNTHLGGEDFDDRMLNYFIEEFEKKNKVDISGDSRALRRLRNECERAKRTLSSSIDAVIDIDGLFKGIDFSSSITQAKFEELNKDLFEECIEIVKECVTNAGVDKSCIHEVVLVGGSSRIPKVQQLLQEFFQGKNLCKALNPDEAVAYGAALQAALLSEGFKNAPNVVMCDVTPLSLGICEKVDIMSIEIPRNSSIPIKKKTKYGTVVENQSFARVLVYEGERARASDNNLLGRFVHSGIPPAPRGHPIMICFNIDEDGILNVSAEEETTGKSNEITITNDKGRMSAKEIARLIQEAKIYEAEDRIS* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4062 539 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Amo14g4062 539 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 390 539 IPR029047 -
Amo14g4062 539 Gene3D - 10 387 - -
Amo14g4062 539 PRINTS 70kDa heat shock protein signature 38 50 - -
Amo14g4062 539 PRINTS 70kDa heat shock protein signature 60 68 - -
Amo14g4062 539 PRINTS 70kDa heat shock protein signature 340 356 - -
Amo14g4062 539 PRINTS 70kDa heat shock protein signature 148 168 - -
Amo14g4062 539 PRINTS 70kDa heat shock protein signature 398 417 - -
Amo14g4062 539 PRINTS 70kDa heat shock protein signature 478 494 - -
Amo14g4062 539 PRINTS 70kDa heat shock protein signature 8 21 - -
Amo14g4062 539 PRINTS 70kDa heat shock protein signature 212 222 - -
Amo14g4062 539 PRINTS 70kDa heat shock protein signature 372 392 - -
Amo14g4062 539 Gene3D - 73 128 - -
Amo14g4062 539 Pfam Hsp70 protein 9 537 IPR013126 GO:0005524|GO:0140662
Amo14g4062 539 Coils Coil 262 289 - -
Amo14g4062 539 SUPERFAMILY Actin-like ATPase domain 201 390 IPR043129 -
Amo14g4062 539 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Amo14g4062 539 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 537 - -
Amo14g4062 539 PANTHER HEAT SHOCK PROTEIN 70KDA 4 537 IPR013126 GO:0005524|GO:0140662
Amo14g4062 539 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Amo14g4062 539 Gene3D Actin; Chain A, domain 4 238 321 - -
Amo14g4062 539 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 396 537 IPR029047 -
Amo14g4062 539 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Amo14g4062 539 Gene3D - 194 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4062 Amo-Chr14 146501774 146503635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4062 1 536 Calmodulin-binding Proteins AT3G12580 65.613 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4062 K03283 - gmx:102667578 759.214