Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4060 ATGGCCAAAAAATGTGAGGGACATGCAGTGGGAATAGATCTTGGAACAACATATTCTTGTGTTGCAGTGTGGCAGCAACAACATTCTCGAGCTGAGATCATACCCAATGACCAAGGCAACAAGACAACTCCTTCTTACGTTGCTTTCACTCATAATCAAAGGTTGATTGGTGATGCTGCTAAGAATCAAGCTGCTGTCAACCCTACCAACACTGTCTTTGATGCTAAGAGGATGATTGGTAGGAAATTTTCTGACCCCAATATTCAGAAAGATAAAGTATTGTGGCCATTCAAAGTCATTTCTGGTGCTACTGGCGAACCAATTGTTGTTGTTAAGTACAAGGGTCAGGAGAGACGCCTTTGTCCTGAAGAAATTTCAGCCATGGTTCTCACAAAGATGCGCGAGACTGCAGAGGCATATTTAGGTTCACCTGTGGAGTATGCAGTCATTACTGTCCCGGCCTACTTCAGTGACTCGCAGCGCAAAGCCACCAGAGATGCCGGTGCCATTGCTGGTCTCACTGTCATGAGGTTAATCAATGAACCTACAGCTGCAGCTATTGCTTATGGTCTTGACAAGAAAGCTGATTGGGTTGGAGAGAGGAATGTTTTGATTTTCGACCTTGGAGGTGGTACTTTTGATGTGACCCTCCTTACCATCAATGATAAGTTGTTTGAAGTTAAGGCCGCTTGTGGAAACACTCATCTTGGTGGAGAAGACTTTGATGACAGAATGTTGAAATACTTTTTAGAAGAGTTTGAAAAGAAGAACAAAGTTGACATAAGTGGTGATTCAAGAGCCTTGAGGAGATTGAGAAATGAATGCGAAAGGGCTAAAAGAACACTCTCAAGCTCTATTGATGCCTTCATCGACATAGATGGCTTATTTAAGAGTATTGACTTCTCTTCATCGATCACTCGTGCTAGGTTCGAGGAACTCAACAAGGACCTCTTTGAAGCGTGTATTCAGACGGTAAAGGAATGTCTTACCATTGCTGATATTGATAAGAGTTGTATAGATGATGTTGTTCTTGTTGGAGGCTCTTCTAGGATTCCCAAGGTGCAAAAACTATTGCAGGAATTCTTCCAGGGGAAAAGTCTGTGCAAGGGACTTAATCCAGATGAAGATGTTGCCTACGGAGCTGCCGTTCAAGCTGCTTTGTTGAGTGAAGGCTTTAAGAATGTTCCAAATGTGGTGCTGCATGATGTTACTCCGTTGTCACTTGGTGTAGACACAAAAGATGATGTTATGAGCATAGTAATTCCTAGGAATTCTAGTGTTCCTATAAAGAAGAAAGGAGCATACGTCACAAGTGAAGATAACCAATCTTGTGCAGATGTTTTGGTTTATGAAGGTGAGAGGGCAAGAGCTTATGATAGCAACTTGCTGGGCCGATTTGTGCTTTCTGGTATTCCTCCTGCTCCTCGAGGACATGACATTATGATATGCTTCAATATAGAAGAAGATGGTATCTTAAATGTATCTGCTGAAGAAGAAACCACTGGTAACAGGAATGAGATTACAATAACCAATGATAAAGGATGA 1545 0.4214 MAKKCEGHAVGIDLGTTYSCVAVWQQQHSRAEIIPNDQGNKTTPSYVAFTHNQRLIGDAAKNQAAVNPTNTVFDAKRMIGRKFSDPNIQKDKVLWPFKVISGATGEPIVVVKYKGQERRLCPEEISAMVLTKMRETAEAYLGSPVEYAVITVPAYFSDSQRKATRDAGAIAGLTVMRLINEPTAAAIAYGLDKKADWVGERNVLIFDLGGGTFDVTLLTINDKLFEVKAACGNTHLGGEDFDDRMLKYFLEEFEKKNKVDISGDSRALRRLRNECERAKRTLSSSIDAFIDIDGLFKSIDFSSSITRARFEELNKDLFEACIQTVKECLTIADIDKSCIDDVVLVGGSSRIPKVQKLLQEFFQGKSLCKGLNPDEDVAYGAAVQAALLSEGFKNVPNVVLHDVTPLSLGVDTKDDVMSIVIPRNSSVPIKKKGAYVTSEDNQSCADVLVYEGERARAYDSNLLGRFVLSGIPPAPRGHDIMICFNIEEDGILNVSAEEETTGNRNEITITNDKG* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4060 514 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Amo14g4060 514 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Amo14g4060 514 Coils Coil 261 288 - -
Amo14g4060 514 PANTHER HEAT SHOCK PROTEIN 70KDA 4 513 IPR013126 GO:0005524|GO:0140662
Amo14g4060 514 Pfam Hsp70 protein 9 513 IPR013126 GO:0005524|GO:0140662
Amo14g4060 514 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 514 IPR029047 -
Amo14g4060 514 Gene3D - 194 368 - -
Amo14g4060 514 Gene3D - 73 128 - -
Amo14g4060 514 PRINTS 70kDa heat shock protein signature 8 21 - -
Amo14g4060 514 PRINTS 70kDa heat shock protein signature 38 50 - -
Amo14g4060 514 PRINTS 70kDa heat shock protein signature 60 68 - -
Amo14g4060 514 PRINTS 70kDa heat shock protein signature 148 168 - -
Amo14g4060 514 PRINTS 70kDa heat shock protein signature 211 221 - -
Amo14g4060 514 PRINTS 70kDa heat shock protein signature 339 355 - -
Amo14g4060 514 PRINTS 70kDa heat shock protein signature 371 391 - -
Amo14g4060 514 PRINTS 70kDa heat shock protein signature 397 416 - -
Amo14g4060 514 PRINTS 70kDa heat shock protein signature 477 493 - -
Amo14g4060 514 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Amo14g4060 514 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 389 514 IPR029047 -
Amo14g4060 514 Gene3D - 10 386 - -
Amo14g4060 514 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 513 - -
Amo14g4060 514 Gene3D Actin; Chain A, domain 4 237 320 - -
Amo14g4060 514 SUPERFAMILY Actin-like ATPase domain 200 389 IPR043129 -
Amo14g4060 514 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4060 Amo-Chr14 146495297 146497042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4060 1 514 Calmodulin-binding Proteins AT3G12580 67.636 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4060 K03283 - gmx:102667578 740.339