Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4045 ATGGGAGAAGGAAAATCATCATCAGTAGCCATAGGAATAGACCTGGGAACAACGTACTCGTGTGTTGCAGTGTGGCGCAATGATGGAGTTGAGATCATAACCAACGACCAAGGGAACAGAATAACACCTTCTTGTGTTGCATTCACTGATACTCAAAGAATGATTGGAGATGCTGCTAAGAATCAAGTTGCTGCCAATCCTACCAACACTGTCTTTGGTGAGATAAAGTCTTTCGCTGCTGAGGAAATCTCATCAATGATCTTAGCAAAGATGCGCGAAATCGCAGAGAAATTTCTTGGAACACAAGTAACGAATGCAGTTATTACAGTGCCTGCTTATTTCAACGACTCTCAGCGGCAAGCCACCAAAGATGCCGGCCGTATCGCCGGCCTGAACGTAATGAGCATACTCAACGAGCCAAGTGCCGCAGCAATTGCTTACGGCCTCGACACTAAAGATCATTTTCATGGTATCAGAACTGTCTTCGTCTTTGATTTTGGCGGTGGTACGTTGGATCTTACTCTTCTCACAATTGACAACAGTGGAAACATAACCGTCAAGATCCATGGCGGAGATACGCATCTCGGTGGACAGGATTTTGATGCAGCAATGGTTGAATTCTTTGCGAGTGAGTTTCAGAGAAAGAACAGGATTGACCTTAGAGGAAACAAAAGAGCCATATGCAGGTTGAAGGTTGCTAGCGAGAGAGCAAAGAGGATTCTCTCTTCAACAACTCAAGCCTCCATTGAGCTGGAATCTCTTCATCAGGGAATCGATTTCTACACATCAATCACTCGCGCTAAGTTCGAGGAAATCAACAAGAATCTCTTTGAGAGGTGCATGGAGCTTGTGCATAAGTGTTTCGAGGATAGTGACATGGCGAAAAGCAGCGTTGATGAGGTTGTGCTGGTAGGTGGATCGACTAGGATTCCGAAATTGGAGCAGCGGTTGAAGGACTTCTTCGACGGGAAGGATCTTTGCAAGAAGTGCATCAATGCGGACGAGGCGGTTGCATATGGTGCTGCAATCCATGCTTCAAAACTGAGTGGTGACAAAAATGAAAAGATTCAAGATCTGAAGCTCTGGGAAGTTACTCCTCTGTCCCTGGGCTTGAAAGAGCAAGGAGGTTTAATGAAAGTTATAATTCCAAGGAACACGATGATTCCTACAAAGAAGCAAGATCTGTTTACAACACAATTCCACAACCAAGAAATAGTCCAGATTCATATCTACGAGGGCGAGAGGAAAATTGCAAGCAACAACAACTTGCTCGGAAGTTTCGATCTGGAAATTCCTCCGGCACCTCGCGGCGTGCCGATGATTAATGTGTGCTTTGAAATAGATTCTAACAGTATCTTACATGTATCGGCGGAGGAAAGAGCAACGGGGGTGATGAAGAAGGTGTCTGTAGTGAGCAACAAAGGAAGATTATCGAGAGAAGAAGTTGAGAGGATGGTGAAAGATGCTGAGAAGTACAAGGCTGAAGATGAAGAGCACAGGCAGAAGATTGAAGCAAGGAATGCTTTGGAGAATCTTGCTTACAATATGAGGAATTTGATAGAAGATGAACCCGTTGCTTCAGAGCTATCTGCACAAGACAAGAAAAAGATTAACAAAGCTATTGATTATACATTGAAATGGATTGATGAGAGTGATTTTGCAACGGTGGATGAGTTTAAGAAGGAAGAGGAAGGTCTTTTGAGCGTGTTTGGTCCAATTATTTTGAAGATGATTGAAGATCTTGATGCTCGTGGTAGTGAAAGTGGAAGAAAAAGCTTGAAGAAACACAGTTTTGAGGTAGTAGTCAGCGTTGTCACTGGGTTGGTTTCTGCAGTGTGTTCTGTTATCCAAGTAATACAAGGATAA 1866 0.4368 MGEGKSSSVAIGIDLGTTYSCVAVWRNDGVEIITNDQGNRITPSCVAFTDTQRMIGDAAKNQVAANPTNTVFGEIKSFAAEEISSMILAKMREIAEKFLGTQVTNAVITVPAYFNDSQRQATKDAGRIAGLNVMSILNEPSAAAIAYGLDTKDHFHGIRTVFVFDFGGGTLDLTLLTIDNSGNITVKIHGGDTHLGGQDFDAAMVEFFASEFQRKNRIDLRGNKRAICRLKVASERAKRILSSTTQASIELESLHQGIDFYTSITRAKFEEINKNLFERCMELVHKCFEDSDMAKSSVDEVVLVGGSTRIPKLEQRLKDFFDGKDLCKKCINADEAVAYGAAIHASKLSGDKNEKIQDLKLWEVTPLSLGLKEQGGLMKVIIPRNTMIPTKKQDLFTTQFHNQEIVQIHIYEGERKIASNNNLLGSFDLEIPPAPRGVPMINVCFEIDSNSILHVSAEERATGVMKKVSVVSNKGRLSREEVERMVKDAEKYKAEDEEHRQKIEARNALENLAYNMRNLIEDEPVASELSAQDKKKINKAIDYTLKWIDESDFATVDEFKKEEEGLLSVFGPIILKMIEDLDARGSESGRKSLKKHSFEVVVSVVTGLVSAVCSVIQVIQG* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4045 621 PRINTS 70kDa heat shock protein signature 9 22 - -
Amo14g4045 621 PRINTS 70kDa heat shock protein signature 169 179 - -
Amo14g4045 621 PRINTS 70kDa heat shock protein signature 331 351 - -
Amo14g4045 621 PRINTS 70kDa heat shock protein signature 438 454 - -
Amo14g4045 621 PRINTS 70kDa heat shock protein signature 298 314 - -
Amo14g4045 621 PRINTS 70kDa heat shock protein signature 358 377 - -
Amo14g4045 621 PRINTS 70kDa heat shock protein signature 106 126 - -
Amo14g4045 621 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 504 582 IPR029048 -
Amo14g4045 621 Gene3D - 2 73 - -
Amo14g4045 621 Gene3D - 74 86 - -
Amo14g4045 621 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 354 510 IPR029047 -
Amo14g4045 621 Gene3D - 507 579 IPR029048 -
Amo14g4045 621 Gene3D - 152 327 - -
Amo14g4045 621 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 73 585 - -
Amo14g4045 621 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 7 72 - -
Amo14g4045 621 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Amo14g4045 621 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 353 506 IPR029047 -
Amo14g4045 621 Coils Coil 482 522 - -
Amo14g4045 621 ProSitePatterns Heat shock hsp70 proteins family signature 3. 301 315 IPR018181 -
Amo14g4045 621 PANTHER HEAT SHOCK PROTEIN 70KDA 73 585 IPR013126 GO:0005524|GO:0140662
Amo14g4045 621 PANTHER HEAT SHOCK PROTEIN 70KDA 7 72 IPR013126 GO:0005524|GO:0140662
Amo14g4045 621 Pfam Hsp70 protein 76 576 IPR013126 GO:0005524|GO:0140662
Amo14g4045 621 Pfam Hsp70 protein 10 73 IPR013126 GO:0005524|GO:0140662
Amo14g4045 621 ProSitePatterns Heat shock hsp70 proteins family signature 2. 163 176 IPR018181 -
Amo14g4045 621 Gene3D - 87 345 - -
Amo14g4045 621 Gene3D Actin; Chain A, domain 4 196 279 - -
Amo14g4045 621 SUPERFAMILY Actin-like ATPase domain 160 347 IPR043129 -
Amo14g4045 621 SUPERFAMILY Actin-like ATPase domain 8 151 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4045 Amo-Chr14 146361739 146364501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4045 4 579 Calmodulin-binding Proteins AT3G12580 60.194 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4045 K03283 - osa:4339012 708.753