Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4043 AAGCATCTATATATCTTATCTCATAACTTGGCTAATTCTGATTCAAGTCATATTTCGCTGAAAGAAGAGAGAATGGGAGAAGGAAAACCAGCATCATCAGTAGCCATAGGAATAGACCTGGGAACAACGTATTCGTGTGTTGCAGTGTGGCACCAGAATCGAGCTGAGATCATACCCAACGACCAAGGGAACACAATAACACCTTCTTGTGTTGCATTCACTGATACTCAAAGAATGATTGGAGATGATGCTAAATATCAAATTGCTTCCAACCCTACCAACACCGTCTTTGACTCAAAGAGGTTAATTGGTAGGAAGTTTAGTGACCCTCATGTCCAGAATGACATGAAATTCTGGCCATTCCTAGTTACCGATGTTGATGACATTCCAATGATTGTTGTTGAGCACAAATGTGAGAAAAAGTTTTTCACTGCTGAGGAAATCACATCAATGATCTTAGCAAAGATGCGCCAAATTGCAGAAAAATTTCTTGAAACACAAGTAAAAAATGCGGTTATTACAGTTCCGGCTTATTTCAATGACTCTCAACGCCAAGCTACCAAAGATGCTGGCCACATCGCCGGCCTCAATGTAATGAGTATACTCAACGAGCCAAGTGCCGCAGCCATCGCTTACGGCCTCAACACAGGAAATTATTTTAATCATTTTTATGGAATCAGAACTGTCTTCGTCTTTGATCTTGGCGGTAGTACGTTGGATCTTACTCTTCTCACAATTGACAACAAAGGAAACATAACCGTCAAGATCCATGGCGGAGACACGCATCTCGGTGGACAGGATTTTGATGCTGCAATGGTTGAATTCGTTGCGAGTGAGTTTCAGAGAAAGAAATGGCTTGATCTTAGAGGAAACAAAAGAGCCATATGCAGGTTGAAGGTTGCTTGCGAGAGAGCCAAGAGGAATCTCTCTTCAACAACTCAAGCCTCCATTGAGGTAGAATCGCTGCATCAGGGAATCGATTTCTATACCACAATCACTCGCGCTAAGTTTGAGGAAATCAACAAGAATCTTTTTGAGAGATGCATGGAGCTTGTGCATGAGTGTTTCGCGGATAGTAACACGGCGAAACAGAGCGTTGATGAGGTTGTGCTTGTTGGTGGCTCGACTAGGATTCCGAAATTGGAGCAGCAGTTGAAGGACTTCTTCGACGGGAAGGATCTTTGCAAGAAGTACATCAATGCGGACGAGGCGGTTGCATATGGTGCTGCAATCCATGCTTCAAAACTGAGTGGTCACAAAAATGAAAAGATTCCAAGGAGCACCGTGATTCCTACAAAGAAGCAAGATCTGTTTGCAACAACCTTCGACAACCAAAGAAGAGTAACGTTTCACATCTACGACGGCGAAAGCAAAATTGCAAGCAACAACAACTTGCTGGGAAGTTTCGATCTGGAAGTTCCTCCGGCACCTCGTGGCGTGGCGAAGATTAATGTGTGCTTTGAAATAGATTCTAACGGTATCTTACATGTATCGGCGGAGGAAATAGCACGGGGAGCGACGAAGAAGGTCTCCGTAGCTACGGAAGAAGTTGAGAGGAGGGTGAAAGATGCTGAGAAGTACAAGGCTGAAGTTGAAGAGCACAGGCAGAAGGTTGAAGCAAGGAATGCTTTGCAGAATCTTGCTTACAATATGAGGAATTTGATAGAAGATGAAGCCATTGCTTCAGAGCTATCTGCAGAAGACAAGAAAAAGATTAACAAAGCTATTGATTATACATTGAAATGGATTGATGAGAGTGATTTTGCAACGGTGGATGAGTTTAAGAAGGAAGAGGAAGGTCTTTTAAGTGTGTTTGGTCCAATTATTTCGAAGATGATTGAAGATCTTGATGCTCGTGGTAGTGAAAGGAGAAGAAAAAGGTTGAAGAAAAAGCTTGAGGTAGCAGCCCGCATTTTCAAAGGGGTGTTTGAAGTGTTTTCTACTGTGAGTGATGTTCTTCAGATGTTCAACTAA 1974 0.4271 KHLYILSHNLANSDSSHISLKEERMGEGKPASSVAIGIDLGTTYSCVAVWHQNRAEIIPNDQGNTITPSCVAFTDTQRMIGDDAKYQIASNPTNTVFDSKRLIGRKFSDPHVQNDMKFWPFLVTDVDDIPMIVVEHKCEKKFFTAEEITSMILAKMRQIAEKFLETQVKNAVITVPAYFNDSQRQATKDAGHIAGLNVMSILNEPSAAAIAYGLNTGNYFNHFYGIRTVFVFDLGGSTLDLTLLTIDNKGNITVKIHGGDTHLGGQDFDAAMVEFVASEFQRKKWLDLRGNKRAICRLKVACERAKRNLSSTTQASIEVESLHQGIDFYTTITRAKFEEINKNLFERCMELVHECFADSNTAKQSVDEVVLVGGSTRIPKLEQQLKDFFDGKDLCKKYINADEAVAYGAAIHASKLSGHKNEKIPRSTVIPTKKQDLFATTFDNQRRVTFHIYDGESKIASNNNLLGSFDLEVPPAPRGVAKINVCFEIDSNGILHVSAEEIARGATKKVSVATEEVERRVKDAEKYKAEVEEHRQKVEARNALQNLAYNMRNLIEDEAIASELSAEDKKKINKAIDYTLKWIDESDFATVDEFKKEEEGLLSVFGPIISKMIEDLDARGSERRRKRLKKKLEVAARIFKGVFEVFSTVSDVLQMFN* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4043 657 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 423 623 - -
Amo14g4043 657 Pfam Hsp70 protein 35 420 IPR013126 GO:0005524|GO:0140662
Amo14g4043 657 Gene3D - 217 395 - -
Amo14g4043 657 Gene3D - 36 412 - -
Amo14g4043 657 Gene3D - 97 151 - -
Amo14g4043 657 PRINTS 70kDa heat shock protein signature 399 419 - -
Amo14g4043 657 PRINTS 70kDa heat shock protein signature 171 191 - -
Amo14g4043 657 PRINTS 70kDa heat shock protein signature 237 247 - -
Amo14g4043 657 PRINTS 70kDa heat shock protein signature 62 74 - -
Amo14g4043 657 PRINTS 70kDa heat shock protein signature 84 92 - -
Amo14g4043 657 PRINTS 70kDa heat shock protein signature 366 382 - -
Amo14g4043 657 PRINTS 70kDa heat shock protein signature 34 47 - -
Amo14g4043 657 PRINTS 70kDa heat shock protein signature 480 496 - -
Amo14g4043 657 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 32 424 - -
Amo14g4043 657 Coils Coil 514 557 - -
Amo14g4043 657 SUPERFAMILY Actin-like ATPase domain 33 215 IPR043129 -
Amo14g4043 657 Gene3D Actin; Chain A, domain 4 264 347 - -
Amo14g4043 657 SUPERFAMILY Actin-like ATPase domain 228 415 IPR043129 -
Amo14g4043 657 ProSitePatterns Heat shock hsp70 proteins family signature 1. 38 45 IPR018181 -
Amo14g4043 657 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 539 617 IPR029048 -
Amo14g4043 657 PANTHER HEAT SHOCK PROTEIN 70KDA 423 623 IPR013126 GO:0005524|GO:0140662
Amo14g4043 657 PANTHER HEAT SHOCK PROTEIN 70KDA 32 424 IPR013126 GO:0005524|GO:0140662
Amo14g4043 657 ProSitePatterns Heat shock hsp70 proteins family signature 3. 369 383 IPR018181 -
Amo14g4043 657 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 424 544 IPR029047 -
Amo14g4043 657 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 413 540 IPR029047 -
Amo14g4043 657 Gene3D - 541 614 IPR029048 -
Amo14g4043 657 ProSitePatterns Heat shock hsp70 proteins family signature 2. 231 244 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4043 Amo-Chr14 146336606 146340132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4043 26 614 Calmodulin-binding Proteins AT3G12580 57.212 0.0 699