Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4030 ATGGCAGTCCAAAGAATTGCAATTGGGTCTCCTGGAGAGGCTGCTCAGCCTGATGCAATTAGAGCAGCATTTGCAGAATTCTTCTCATTGCTTATTTTTGTTTTTGCTGGTGAAGTCTCTGGCATGGCTTATACAATACCATCTGGTCTGATAGCTGCATCATTGTCCCATGCATTTGGTCTTATTGTGGCTGTCTCTGTTGGTGCAAACATTTCTGGTGACCATGTGAACCCTGCTGTTACTTTTGGTGCCTTCATTGGAGGAAACATAACCCTTTTGAGGAGCATTTTGTATTGGTTTGCACAGTTGCTTGGTTCGGTTCTTGCTTGCATTCATCTCAGGTCTGCTACTGGAGGAATGGTAATAACCAATCATTCATGTTCATCTATCATGCACAAATACTTTAAAATTGGTGATGAACTCCTTTTATAA 432 0.4167 MAVQRIAIGSPGEAAQPDAIRAAFAEFFSLLIFVFAGEVSGMAYTIPSGLIAASLSHAFGLIVAVSVGANISGDHVNPAVTFGAFIGGNITLLRSILYWFAQLLGSVLACIHLRSATGGMVITNHSCSSIMHKYFKIGDELLL* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4030 143 SUPERFAMILY Aquaporin-like 16 127 IPR023271 -
Amo14g4030 143 ProSitePatterns MIP family signature. 75 83 IPR022357 -
Amo14g4030 143 PANTHER AQUAPORIN TIP1-1 1 129 - -
Amo14g4030 143 Gene3D Glycerol uptake facilitator protein. 4 143 IPR023271 -
Amo14g4030 143 Pfam Major intrinsic protein 15 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4030 143 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4030 143 PRINTS Major intrinsic protein family signature 57 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4030 143 PRINTS Major intrinsic protein family signature 94 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4030 143 PANTHER AQUAPORIN-8 1 129 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4030 Amo-Chr14 146219356 146220049 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4030 1 128 Major Intrinsic Protein MIP AT4G01470 69.853 2.85e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4030 K09873 - gmx:100788583 202.216