Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4026 ATGGCAGTCCAAAGAATTGCAATTGGGTCTCCTGGAGAGGCTGCTCAGCCTGATGCAATTAGAGCAGCATTTGCAGAATTCTTCTCATTGCTTATTTTTGTTTTTGCTGATAAACTAACAAACAATGGACCAGCAACACCATCTGGCCTGGTAGCTGCATCATTGTCCCATGCATTTGGTCTTATTGCGGCTGTCTCTGTTGGTGCAAACGTTTCTGGTGACCATGTGAACCCTGTTACTTTTGGTAACTTCATTGGAGGAAACATAACCCTTTTGAGGAGCATTTTGTATTGGATTGCACAGTTGCTTGGTTCAGTTCTTGCTTGCATTCTTCTCAAGTTTGCTGCTGGAGGAATGGAAACAACAGGTTTCTCATTATCCTCTAGTGTGTCAGAATGGAATGCATTGGTGTTTGAAATAGTGATGACATTTGGGTTAGTGTACACAGTTTATGGCACAGCAGTGGATCCAAAGAAAGGAAATGTGGGAATTGTAGCCCCAATTGCAATTGGATTCATTGTGGGTGCAAACATCTTAGTAGGTGATGCATTTGATGGTGCATTAATGAATCCAGCAGTGTCATTTGGTCCTGCTGTTGTTAATTGGTCATGGACTCATCATTGGGTGTATTGGGTTGGCCCCTCCATTGGTGCTGCCATTGCTGCCATTATGTATGATAATATCTTCATTGGTGATGGTCAGGAACCCCTTTCAAGCAGTGACTACTAG 729 0.4307 MAVQRIAIGSPGEAAQPDAIRAAFAEFFSLLIFVFADKLTNNGPATPSGLVAASLSHAFGLIAAVSVGANVSGDHVNPVTFGNFIGGNITLLRSILYWIAQLLGSVLACILLKFAAGGMETTGFSLSSSVSEWNALVFEIVMTFGLVYTVYGTAVDPKKGNVGIVAPIAIGFIVGANILVGDAFDGALMNPAVSFGPAVVNWSWTHHWVYWVGPSIGAAIAAIMYDNIFIGDGQEPLSSSDY* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4026 242 Gene3D Glycerol uptake facilitator protein. 4 241 IPR023271 -
Amo14g4026 242 PANTHER AQUAPORIN TIP1-1 1 242 - -
Amo14g4026 242 Pfam Major intrinsic protein 15 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4026 242 SUPERFAMILY Aquaporin-like 16 232 IPR023271 -
Amo14g4026 242 CDD MIP 21 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4026 242 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4026 242 PRINTS Major intrinsic protein family signature 57 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4026 242 PRINTS Major intrinsic protein family signature 93 112 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4026 242 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4026 242 PRINTS Major intrinsic protein family signature 171 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4026 242 PRINTS Major intrinsic protein family signature 208 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo14g4026 242 PANTHER AQUAPORIN-8 1 242 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4026 Amo-Chr14 146201648 146203191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4026 1 242 Major Intrinsic Protein MIP AT4G01470 76.190 2.66e-132 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4026 K09873 - gmx:100788583 416.772