Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4025 ATGATGGTTTCGAGAGGATTGTTCGGTTGGTCCCCGCCGCACGTGCAACCTCTGACGCCAGTTTCGGAGGTTTCGGAGCCGCCGGAGTCTCCGTCGCCGTACCTTGACCCTGGCGCCGAGACCTCCGCGTCGCAGCAGCAGGTGGAGGTCGATGAGGAGATTGAGGAGCCGGAGGAGGTCGAGCCTCCGCCGGCGGCGGTTCCTTTCTCGAGGCTCTTCGCCTGCGCTGACCGGTTCGACTGGTTCCTCATGGCTGCTGGTTCGGTCGCCGCCGCAGCTCACGGCGCCGCCCTCGTCGTTTACCTGCACTATTTCGCGAAGATCATACATGTGCTGGTGGAACCTAAGCACGAGCTGTTTCACAGGTTCAATGAGCTTGCTTTAACCATTGTTTATATTGCCGCGGGAGTTTTTGCAGCTGGTTGGATTGAGGTTTCTTGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTCATAAGGTCAAAATATGTTCAAGTGTTACTAAATCAAGATATGAGCTTTTTTGATACTTATGGAAATAATGGAGACATTGTAAGTCAAGTTTTGAGTGATGTGCTGCTTATTCAGTCTGCCCTTAGTGAAAAAGTTGGAAATTATATTCACAATATGGCTACGTTCTTCAGTGGTCTTGTCATTGGACTCATAAATTGTTGGCAGATTGCTCTGATAACGTTAGCAACAGGTCCGTTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTCCACCGACTTGCAGAGAATATTCAAGATGCATATGCTGAAGCGGCTAGCATTGCCGAACAGGCAGTTTCGTATGTAAGGACATTGTATGCATTCACAAATGAAACATTGGCCAAGTATTCCTATGCAACATCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCATTGCAACTCTGGGTTGGAAGGTTCTTGGTTATACATGAAAAAGCACATGGTGGTGAAATTATAACAGCCCTGTTTGCTGTAATTCTAAGTGGCTTGGGATTGAATCAAGCAGCAACAAACTTCTACTCTTTTGATCAGGGGAGAATTGCTGCTTATAGATTATTTGAGATGATAAGCCGGTCATCCTCATCTGATGATCATGACGGCATTACTCCTGATTCTGTGCAAGGAAATATAGAGTTTCGGAATGTTTATTTCAGCTATCTGTCTCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTTAGTGTACCTGCTAAGAAAGCTGTGGCTCTTGTTGGCAGAAATGGCTCTGGGAAAAGTAGTATTATTCCACTAATGGAGCGTTTCTATGATCCTACATTAGGGGAAGTTCTTCTAGATGGAGAAAACATCAAGAACTTGAAACTTGAATGGCTTAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTTAGTTTGAGTATAAGAGATAATATTGCTTATGGGAGGGATGCCACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACATTTATCAGCTCATTGGAGAAAGGTTATTACACACAGGTTGGCAGGGCTGGTCTGGCTTTGACTGAAGAGCAAAAAATAAAACTTTCTATTGCTAGAGCTGTGCTTTTAAATCCATCAATTCTTCTACTTGATGAGGTTACTGGTGGTCTTGATTTTGAGGCTGAGAGGGCTGTTCAGGGGGCTTTGGACCTACTTATGTTGGGACGCTCAACAATAATAATTGCTCGACGGCTTAGTCTCATAAGGAATGCTGATTATATCGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAATTATTGTCCTTGGATGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAATTACAAGGAGACTGCAGCGTTTCAAATTGAGAAGGATTCTTCAGCAAGTCATAGCTTCAAGGAACCATCCTCCCCTAAAATGTTGAAGTCACCTTCTCTTCAAAGAGTATCTAATGTATCCCGCCCTCCAGACGGAACCTTTAACTTGCTTGAATCTCCAAAGGCCCGGAGCCCACCACCTGAGAAGATGGTGGAAAATGGTCAGGCCCTTGATGGAGCAGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAGATGAGACTTCCAGAGTTACCCAAGCTTGATGTGCAGTCTCTGCATCGTCAAAAATCAAATGGTTCTGACCCAGAATCTCCTGTTTCTCCCCTTTTAACATCTGATCCCAAGAGTGAACGCTCTCATTCGCAGACTTTTAGTAGAACGCAGAGTTACTCTGATGATCTTTCAGCTGAAAAGAGAAAATTGAAGGATACAAGGCATCAAAAACCACCATCACTTAGGAAGCTTGCTGAGCTTAGCTTCGCTGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTATCTTTGGTTCTTTCAATCCTCTTCTTGCTTATGTAATTGGCCTTGTGGTGACAGCTTACTATAATATTGATAAAGAACATCACTTACGATGGGAGGTAAACAAGTGGTGTTTGGCCATTGGCTGCATGGGTATTGTGACAGTAATTGCCAACTTTTTACAGCATTTCTACTTTGGTATCATGGGGGAGAAAATGACAGAAAGGGTTAGGAGAATGATGTTCTCAGCCATGCTTCGCAATGAAGTTGGGTGGTTTGATGATGAGGAAAACAGTGCTGACAATTTATCCATGCGATTGGCCAATGATGCTACTTTTGTACGAGCTGCTTTTAGCAATAGGCTGTCTATATTTATTCAGGACAGTGCTGCAATTATTGTTGGTCTTCTGATTGGTGCCTTGCTGCACTGGCGGTTAGCACTTGTGGCTTTTGCAACCCTTCCAATTCTCTGTGTTGCTGCAATTGCCCAGAAGATGTGGCTTGCTGGATTTTCAAGGGGCATACAGGAAATGCATAGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGAAACATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTAATGGAACTTTATAGGCTGCAGTTGAAGAAAATATTTAGGAAGAGCTTTCTTCATGGGATGGCAATCGGTTTTGCATTTGGCTTTTCACAGTTCCTACTTTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGGGAGATGTGTAAAACATGGTTATGTGCAACTATCTACTGCACTCAAGGAGTATATGGTTTTCTCATTTGCGACATTTGCGCTTGTAGAGCCTTTTGGATTGGCTCCTTACATCCTTAAACGACGGAAGTCTCTCATATCAGTGTTTGATATCATAGATCGTGTGCCTAAAATTGATCCTGATGATAGCTCAGCATTGAAGCCACCCAATGTACATGGAAGAATTGAGTTAAAAAATGTTGATTTCTGTTACCCAACTCGTCCAGAAGTTTTGGTATTGAGCAATTTTAGTCTCAAAGTCAATGGTGGGCAAACGGTTGCTATTGTGGGAGTTTCTGGGTCAGGAAAGAGCACTATTATATCTTTGATTGAGAGGTTTTATGATCCAGTTTCTGGCCAAGTTTTACTTGATGGAAGGGATTTGAAGGTATACAACTTGAGATGGCTGAGGAGCCACCTTGGCCTGGTTCAGCAGGAACCTATTATCTTCTCAACAACCATAAGGGAAAACATCATATATGCAAGGCACAATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCCCATCACTTTATTAGCAGCTTGCCTCATGGTTATGACACTCACGTTGGGATGCGAGGTGTTGACTTAACTCCTGGACAAAAACAGAGAATTGCAATTGCGAGGGTTGTGCTGAAAAATGCGCCTATCTTGTTGTTGGATGAAGCAAGCTCATCAATTGAATCCGAGTCAAGCCGGGTGGTGCAAGAAGCTCTAGACACACTAATAATGGGGAACAAGACCACCATTTTAATTGCGCATAGGGCTGCAATGATGAGGCATGTGGACAATATCGTAGTGCTTAATGGGGGACGGATAGTGGAGGAGGGGACTCATGATTCATTGATGGCTAAGAATGGTCTGTATGTCCGATTGATGCAACCTCATTTTGGTAAGGCTTTGCGTCAGCATCGGCTTGTTTAG 4200 0.4374 MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSASQQQVEVDEEIEEPEEVEPPPAAVPFSRLFACADRFDWFLMAAGSVAAAAHGAALVVYLHYFAKIIHVLVEPKHELFHRFNELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHEKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSDDHDGITPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLSVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLEKGYYTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLSLDGLYAELLRCEEAAKLPKRMPVRNYKETAAFQIEKDSSASHSFKEPSSPKMLKSPSLQRVSNVSRPPDGTFNLLESPKARSPPPEKMVENGQALDGADKEPSIRRQDSFEMRLPELPKLDVQSLHRQKSNGSDPESPVSPLLTSDPKSERSHSQTFSRTQSYSDDLSAEKRKLKDTRHQKPPSLRKLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYNIDKEHHLRWEVNKWCLAIGCMGIVTVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAIIVGLLIGALLHWRLALVAFATLPILCVAAIAQKMWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFRKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGRCVKHGYVQLSTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDRVPKIDPDDSSALKPPNVHGRIELKNVDFCYPTRPEVLVLSNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVSGQVLLDGRDLKVYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLMAKNGLYVRLMQPHFGKALRQHRLV* 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4025 1399 MobiDBLite consensus disorder prediction 792 808 - -
Amo14g4025 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 637 IPR027417 -
Amo14g4025 1399 SMART AAA_5 430 609 IPR003593 -
Amo14g4025 1399 SMART AAA_5 1177 1364 IPR003593 -
Amo14g4025 1399 Pfam ABC transporter 424 568 IPR003439 GO:0005524
Amo14g4025 1399 Pfam ABC transporter 1168 1316 IPR003439 GO:0005524
Amo14g4025 1399 MobiDBLite consensus disorder prediction 664 729 - -
Amo14g4025 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1139 1386 IPR027417 -
Amo14g4025 1399 SUPERFAMILY ABC transporter transmembrane region 809 1135 IPR036640 GO:0005524|GO:0016021
Amo14g4025 1399 Gene3D ABC transporter type 1, transmembrane domain 786 1159 IPR036640 GO:0005524|GO:0016021
Amo14g4025 1399 PANTHER ABC TRANSPORTER B FAMILY 19 1395 - -
Amo14g4025 1399 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 827 1119 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo14g4025 1399 Coils Coil 249 269 - -
Amo14g4025 1399 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1395 - -
Amo14g4025 1399 Pfam ABC transporter transmembrane region 88 353 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo14g4025 1399 Pfam ABC transporter transmembrane region 832 1096 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo14g4025 1399 MobiDBLite consensus disorder prediction 751 791 - -
Amo14g4025 1399 Gene3D - 393 646 IPR027417 -
Amo14g4025 1399 Gene3D - 1172 1393 IPR027417 -
Amo14g4025 1399 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 403 638 IPR003439 GO:0005524
Amo14g4025 1399 MobiDBLite consensus disorder prediction 664 697 - -
Amo14g4025 1399 CDD ABC_6TM_Pgp_ABCB1_D2_like 822 1133 - -
Amo14g4025 1399 CDD ABC_6TM_Pgp_ABCB1_D1_like 105 378 - -
Amo14g4025 1399 MobiDBLite consensus disorder prediction 1 63 - -
Amo14g4025 1399 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1150 1387 IPR003439 GO:0005524
Amo14g4025 1399 MobiDBLite consensus disorder prediction 742 808 - -
Amo14g4025 1399 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 85 370 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo14g4025 1399 Gene3D ABC transporter type 1, transmembrane domain 62 384 IPR036640 GO:0005524|GO:0016021
Amo14g4025 1399 SUPERFAMILY ABC transporter transmembrane region 71 383 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4025 Amo-Chr14 146191714 146200903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4025 54 695 Calmodulin-binding Proteins AT2G36910 44.393 4.35e-168 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4025 K05658 - gmx:100789116 2466.03