Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4007 ATGGATTATTCTTCTTCGTTATCTTCTCTGAGCTTTCATTTCAATAGCTTCAGAGCTTCAGCGAACTCGTTCCTCTCACAATACGAACCTCTTCTTCTGCTTCTCGCTCCTCTCTTCTCTCTCATCCTCGCACACTTGCTTCGCTCATTTTTCAATCTCATCCATGAAAGAGGCCTCAAAGCTTCGCTCCTAGGGTTTCTTATGAGCTCTGTCAAATTGATCCCTGGAGTGAAGAGTTACATTGATAGAGAAAAGCAGAAGGTTGTGGATAAAATGCAGTCTGATGGTAAATCTAAAAGAGAAGGTTGGAGAACAGAGTTGCCAAGCACAGGACTAGGCACTTTAGTACTTGAGAAAATGAAAGAGGAGAAAAGAAAAGATGTGGCTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGTGGAAGTGAAATTGATGGACATTTTTCTCTGATAAATGAAGCATGCTCAATGTTTGCACATACCAATCCCTTGCATTTGGATGTATTCCAGAGTGTTGGACGCTTTGAGGCAGAAGTGGTTGCAATGACTGCAGCACTTCTTGGAAGTCAGGAAAAAAGTTCTGGAGGACAAGTATGTGGCAATATGACATCAGGAGGGACTGAAAGTATATTATTAGCGGTCAAATCATCTCGTGATTATATGAAATCTAAGAAAGGAATTACAAGACCTGAAATGATAATTCCTGTGTCTGCACACTCAGCATATGACAAGGCTGCACAGTATTTCAATATCAAACTATGGCGTGTTCCAGTTAACAAAGACTTCCAAGCGGATGTAAAAGCAATTCGACGCCATATTAACAAAAATACCATCTTGATTGTTGGATCCGCTCCAGGGTTTCCTCATGGAATAATTGACCCTATTGAAGAACTTGGTCAGTTGGCATCAAGCTTTGGTATTTGTCTCCATGTAGACCTTTGCCTGGGTGGCTTTGTATTGCCTTTTGCCCGTGAGCTTGGGTACCCTATACCACCTTTTGATTTTTCTGTTAAAGGAGTATCTTCAATATCAGTGGACGTGCATAAATATGGTTTAGCTCCCAAAGGAACAAGTATAGTCCTGTATAGAGACCATGAAATCAGAAAGCATCAATTTGTTGCGGTTACCGAGTGGAGTGGTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGGGGGTCTAATTGCAGGGGCATGGGCAGCAATGATATCTCTAGGGAAAGAAGGTTACTTGGAAAACACGAAAACAATTATGGAAGCAACAAAAAGAATACAGAAAGGCATAGAAGAAATTTCTGAGTTGTATGTTGTTGGAAGACCCGACATGACCATTGTGGCTTTTGGATCTAATGTCCTGGACATATTTGAAGTCAATGATTTGATGACATCCAAAGGGTGGCATTTGAATGCTTTGCAGAGACCCAACAGCATCCATATCTGCGTGACACTGCAGCATGTGCCAGTTGTTGAAGACTTCCTCACTGATTTGAAGGAATCCGTTGAAACTGTGAAGGAAAATCCTGGTCCTATAAGTGGAGGCCTAGCACCGATATATGGTGCCGCAGGGAAGATGCCAGATAGAGGCATGGTCCAGGACTTGCTGGTGGATTATATGGACGGTACCTGCTAG 1638 0.4274 MDYSSSLSSLSFHFNSFRASANSFLSQYEPLLLLLAPLFSLILAHLLRSFFNLIHERGLKASLLGFLMSSVKLIPGVKSYIDREKQKVVDKMQSDGKSKREGWRTELPSTGLGTLVLEKMKEEKRKDVAWQGKCSGTVYIGGSEIDGHFSLINEACSMFAHTNPLHLDVFQSVGRFEAEVVAMTAALLGSQEKSSGGQVCGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVNKDFQADVKAIRRHINKNTILIVGSAPGFPHGIIDPIEELGQLASSFGICLHVDLCLGGFVLPFARELGYPIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRDHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGGLIAGAWAAMISLGKEGYLENTKTIMEATKRIQKGIEEISELYVVGRPDMTIVAFGSNVLDIFEVNDLMTSKGWHLNALQRPNSIHICVTLQHVPVVEDFLTDLKESVETVKENPGPISGGLAPIYGAAGKMPDRGMVQDLLVDYMDGTC* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4007 545 Gene3D Aspartate Aminotransferase, domain 1 114 508 IPR015422 GO:0003824
Amo14g4007 545 Gene3D - 106 542 - -
Amo14g4007 545 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 25 545 - -
Amo14g4007 545 Pfam Pyridoxal-dependent decarboxylase conserved domain 175 450 IPR002129 GO:0016830|GO:0019752|GO:0030170
Amo14g4007 545 SUPERFAMILY PLP-dependent transferases 84 508 IPR015424 -
Amo14g4007 545 PANTHER - 25 545 - -
Amo14g4007 545 Gene3D - 142 409 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4007 Amo-Chr14 146052665 146058773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4007 161 505 Calmodulin-binding Proteins AT3G17760 25.956 2.12e-24 104