Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4003 ATGAATCAATCCACCAACTATTTCATCATTCATATGCCACACTGCTTCACTGCTTCTTTGATTTCAATTGTTGTATACCACGTCACGGCCGATGATGGAGCGGCCGGGGTGGCGTCTTCCTCGTCGCCGGCCCCGTGGTTGTGGGCGACGTCATCCTTATCATCAGAAGGAGGCATGTATGATGTTTTTCTGAACTTTAGAGGCGAGGACACAAGGTTCTTATTCACAGATTATCTCTATCATGGTCTGGCCGATGTAAAAAAACTCCAAGTATTCAGGGATGATCCGGCTCTGGAACTAGGTGACGCAATTAAACCTACTCTGATGGAAGCCATTAAAAGATCTAGGATTCATATTGTTGTGATGAGTGAAAACTATGTATCTTCCTCATGGTGCCTCCTGGAACTAGAGCAGATGCTCAAGTACTCCAAAAACAATGGAAACGAACGATCCATGGTCCCAGTTTTTTATCACGTAAAGCCCGCAGAAGTGAGATATCAGATTAGCGCCAAATATAAGGAAGCCATGGAGAAACATGAAAAGAGAGAAGGCAAAGACAAGGGGGAAGCGTGGAAGTCTGCTCTATTTACAGTTTGCGACCTAAGTGGACAACACATTGTTGAGGAGCGAGATCATTATGAAACAGGGGTCATAGGCAAGATTGTTGAACAAGTGTCTGCAAAACTTCTAGAGATCAGGCAACAATTAAATAGATTTGATTCTCAATTTGGAGTGGTTGAATCACTTTTGAACCTTGAATCTTGTGATACTGTTGGTGTGGTGGGAATTTATGAAGATCCTAAAATAGGCAAAAGTTACATAAGAGTATTTGCTTTTGAGCTGTACTATAAGATCAAATATAAGTTCCAAGCAGCAGGTTTTCTTGTTGATGTTAGTGAACTTCTAAGGAAAACCACCGATGACGATCGCTTGGAAATTTTCCAAAAGGAGCTTCTTTCTGATATGGATGTGAAGACCATGCATGAGTTGAAGCATAAAAAGATGCTTCTGGTTCTGGAAGGGGTTGATAGTGAAGAGCATTTGGAGTTGCTAGTGGGAATGGGAATAAGTGATTGGTTTGGTGGTGGTAGTAGGATCCTCATAGCAACAGAAAACAGAAATCTCTTTCAGGATTGTCCTGCTGTGATGAATGGTGTTAAGCTTGAGAAACATTGCATACGTGAAGGTGAATTCGGGAAGGAAAAGATTGTGAAGGAGAAGAAGGTAGTGGGATTTGTGAAAGAATTCATCGGTGTAATTAATCAACTGAAGGAAGAAGATTCAAATAGGAGGAATGTTGTTTCAATTAGCGGCATGGGCGGGTCGGGCAAGACTACTCTTGCCCGAATGATCTATGACAGCAATGAGGTGAGGGAGGTATTCCCTTGTCGTGAATGGGTAACTGTTTCCAAACAGTGCATTGAAAAGGAAGTTTACAGAAACTGTGCATATCACTGA 1458 0.4211 MNQSTNYFIIHMPHCFTASLISIVVYHVTADDGAAGVASSSSPAPWLWATSSLSSEGGMYDVFLNFRGEDTRFLFTDYLYHGLADVKKLQVFRDDPALELGDAIKPTLMEAIKRSRIHIVVMSENYVSSSWCLLELEQMLKYSKNNGNERSMVPVFYHVKPAEVRYQISAKYKEAMEKHEKREGKDKGEAWKSALFTVCDLSGQHIVEERDHYETGVIGKIVEQVSAKLLEIRQQLNRFDSQFGVVESLLNLESCDTVGVVGIYEDPKIGKSYIRVFAFELYYKIKYKFQAAGFLVDVSELLRKTTDDDRLEIFQKELLSDMDVKTMHELKHKKMLLVLEGVDSEEHLELLVGMGISDWFGGGSRILIATENRNLFQDCPAVMNGVKLEKHCIREGEFGKEKIVKEKKVVGFVKEFIGVINQLKEEDSNRRNVVSISGMGGSGKTTLARMIYDSNEVREVFPCREWVTVSKQCIEKEVYRNCAYH* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4003 485 Pfam TIR domain 60 240 IPR000157 GO:0007165
Amo14g4003 485 Coils Coil 222 242 - -
Amo14g4003 485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 404 481 IPR027417 -
Amo14g4003 485 Pfam NB-ARC domain 419 480 IPR002182 GO:0043531
Amo14g4003 485 SUPERFAMILY Toll/Interleukin receptor TIR domain 50 203 IPR035897 -
Amo14g4003 485 ProSiteProfiles TIR domain profile. 58 229 IPR000157 GO:0007165
Amo14g4003 485 PANTHER TMV RESISTANCE PROTEIN N-LIKE 34 220 - -
Amo14g4003 485 PANTHER TOLL/INTERLEUKIN-LIKE RECEPTOR-PROTEIN 34 220 - -
Amo14g4003 485 Gene3D - 58 226 IPR035897 -
Amo14g4003 485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 380 IPR027417 -
Amo14g4003 485 Gene3D - 391 483 IPR027417 -
Amo14g4003 485 Gene3D - 227 385 IPR027417 -
Amo14g4003 485 SMART till_3 59 201 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4003 Amo-Chr14 145992875 145995417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4003 109 379 WRKY Transcription Factor Family AT4G12020 26.502 4.18e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4003 - - aip:107635602 822.387