Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3987 ATGTTATTCAATATGACCATGGTTCCTTCTCAAAACAACAAGAACTATGCTTTCTTCTACACTGCTATGAACCAAGTTGAAGGATATAACAGTAATTACAGTAATTGCTTATTAGGATCTGATTTTCTTCTGAGGAATCACATGGCAGAGGATCTGTCAAGAGCCACCACCAACAACCACAACCATGAAGAACAAGAAGAAGAAGAAGAAGCAACTTCAAAGGGAGAAAGAGAACAAGAACAAGAACATGAACATGAAGAAGAAGAACAATCAGGAATCAACAACAATAATAGCAGTAACTGGCTTCAATTGAGCATAGGTTTTCATGATCATGATGCAGCAGCAACAACAAAACAAGACCATCATCATCATCATCATCTTGAAGAAGAAGCAGGTTCAACAATGGCTGCAGCTACAACAGGTTCTGCAGGATCATCATCATCATCACTTGTAGAGCTAGAGTTACTACCAGGTCGCCATTTCAATTGGGCTTCTTCATCTTCTTCTTCAAGAACAGTGATGTTTCCTTTTTCTTCTTCTTCTTCTTCTTTGTTCTATGAACAACAACATCAAACGTCTATGTCTTTGTCCATGTCTATGTCCATGGCATGTGGACCCAACATGAGTGCTCCAACAACAACCTTTGCAACTCATCATCAACAACAAGACATGATGCTAATGAATTGGGCATCATCGTTTTCTTCACATCCTCTCATGCCTCCTTTTCTTTCTTCTTCTTCATCTTTGTCGTCTTTATCACAATCTTGTTCTTCATCTTCTTTGAGGCCTTCTTATTTTCCAACTACTCCTCCCTTTCATCATCAATTTGATGTGGCTGGACCAAGCAGCTCTCAAGATTTCACTTCTTCTACAGTTAGAGTTGTTGATCCTCCAAGAAGACCTCATTCTGGAATTTGGTTCATGCTTCAAGCTGAACAAAACCAAGTTAGAGAACCATTTTTACCTCAAATAGCTAAGAGCTACCTTAGAATCAAAGATGGAAGGATGACAGTTCGGTTGCTAATGAAATATCTAGTTAGCAAACTCAGGCTTCAAATGGAATCAGAGATAGAGATAACATGCAGAGGACAGAAACTTTTACCATTCTTAACGTTGCAGCATGTGAGGGATAACATTTGGACTCAGAGGGACACTACCAACATAACAACAACATCAAGACCTTTGCTTTCAGATTCATCAACCACAGATCATGTCATGGTTCTCCATTACAGTAGAACCAATGCTTAA 1248 0.3902 MLFNMTMVPSQNNKNYAFFYTAMNQVEGYNSNYSNCLLGSDFLLRNHMAEDLSRATTNNHNHEEQEEEEEATSKGEREQEQEHEHEEEEQSGINNNNSSNWLQLSIGFHDHDAAATTKQDHHHHHHLEEEAGSTMAAATTGSAGSSSSSLVELELLPGRHFNWASSSSSSRTVMFPFSSSSSSLFYEQQHQTSMSLSMSMSMACGPNMSAPTTTFATHHQQQDMMLMNWASSFSSHPLMPPFLSSSSSLSSLSQSCSSSSLRPSYFPTTPPFHHQFDVAGPSSSQDFTSSTVRVVDPPRRPHSGIWFMLQAEQNQVREPFLPQIAKSYLRIKDGRMTVRLLMKYLVSKLRLQMESEIEITCRGQKLLPFLTLQHVRDNIWTQRDTTNITTTSRPLLSDSSTTDHVMVLHYSRTNA* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3987 415 MobiDBLite consensus disorder prediction 115 145 - -
Amo14g3987 415 Gene3D - 296 389 - -
Amo14g3987 415 MobiDBLite consensus disorder prediction 56 100 - -
Amo14g3987 415 MobiDBLite consensus disorder prediction 115 131 - -
Amo14g3987 415 MobiDBLite consensus disorder prediction 56 91 - -
Amo14g3987 415 PANTHER RING FINGER PROTEIN 10 412 - -
Amo14g3987 415 Coils Coil 52 81 - -
Amo14g3987 415 PANTHER RING FINGER PROTEIN 10 412 IPR044171 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3987 Amo-Chr14 145790479 145803347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3987 318 411 C3H Transcription Factor Family AT3G23060 37.234 1.48e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3987 - - adu:107486464 371.318