Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3984 ATGTTTATGTCTTCTCTCCTTTGGAGCTGCATTGCAATGTGTGTTTCACTTGCACTTGCACTTCCACACCCTCCTTCTTCTTCTTCTTCACACCAACCTCTTAAGATTACTCGCTTACCAGGTCAACCCCATGTTGAGTTTCAACAGTTTTCAGGTTATGTTACTGTTGATAACAGCAACAACAAAGCACTTTTCTTCTACTTCGTTGAAGCTCAAAAGGATGCACCTTCCAAACCCCTTGTTCTTTGGCTCAATGGAGGGCCTGGTTGTTCTTCTATTGGAGTTGGTGCATTTTCTGAAAATGGACCATTTAGGCCAAAAGGAGAGGCCTTGGTGAGGAACCAATTCAGCTGGAACAGAGAAGCAAATGTTTTGTACTTGGAAACACCAATTGGAGTTGGATTCTCTTATTCAAAAGATACTTCCTCTTATGTGGGTGTAAATGACAAGATCACAGCCAGGGATAACTTAATATTCTTGCAAAACTGGTTTGTAAAGTTCCCACACTACAGAAACAGAAGTTTGTTCATAGTAGGAGAAAGCTATGCTGGCCACTATGTTCCTCAACTTGCTGAGCTTATGCTAGAATTCAACAGAAAAGAGAAGTTGTTCAATTTAAAAGGCATTGCTCTTGGCAACCCAGTTCTTGAATTCGAAGCAGATTTCAATTCAAGAGCTGAGTTCTTCTGGTCACATGGACTAATCTCAGATGTAACATTTCAAATGTTCACATCTGTGTGTAACTATTCAAGATATGTGAGGGAATATTATAGTGGAGCTGTTTCTCCTATGTGTTCAAGGGTTATGAGCCAAGTTAGCACAGAAACTAGTAGATTCGTCGACAAGTATGATGTTACACTTGATGTTTGTATATCTTCAGTGTTTTCACAAACCAAGGTCCTCAATCCTCAGCAAGTTACCGAAACCATAGACGTGTGCGTTGAAGATGAAACAGTGAATTATCTGAACAGGAAGGATGTTCAGTCGGCTTTGCATGCGCGACTGGTTGGAGTAACAAGATGGTCTGCTTGCAGCAATGTACTAGATTATGAGCTGCGCGATTTGGAGATACCAACAATCACAGTTGTTGGTAAATTAGTAAAGGCAGGAATACCAGTCTTGGTCTACAGTGGTGATCAAGATTCAGTTATACCATTGACTGGAAGTAGAAAATTAGTGCACCAATTGGCAAGAAAACTGAGGCTGAGAACCACTGTGCCATACAGGGTCTGGTTTGAGGGGGAGCAGGTGGGTGGCTGGACTCAAGTTTATGGTAATATCCTTTCATTTGCCACCATTAGAGGAGCATCACATGAAGCTCCATTTTCACAGCCTAAGAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAGGGTCGACCTCTACCTGAAGAATTTTAA 1398 0.4156 MFMSSLLWSCIAMCVSLALALPHPPSSSSSHQPLKITRLPGQPHVEFQQFSGYVTVDNSNNKALFFYFVEAQKDAPSKPLVLWLNGGPGCSSIGVGAFSENGPFRPKGEALVRNQFSWNREANVLYLETPIGVGFSYSKDTSSYVGVNDKITARDNLIFLQNWFVKFPHYRNRSLFIVGESYAGHYVPQLAELMLEFNRKEKLFNLKGIALGNPVLEFEADFNSRAEFFWSHGLISDVTFQMFTSVCNYSRYVREYYSGAVSPMCSRVMSQVSTETSRFVDKYDVTLDVCISSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSALHARLVGVTRWSACSNVLDYELRDLEIPTITVVGKLVKAGIPVLVYSGDQDSVIPLTGSRKLVHQLARKLRLRTTVPYRVWFEGEQVGGWTQVYGNILSFATIRGASHEAPFSQPKRSLVLFKSFLEGRPLPEEF* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3984 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Amo14g3984 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Amo14g3984 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Amo14g3984 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Amo14g3984 465 SUPERFAMILY alpha/beta-Hydrolases 37 462 IPR029058 -
Amo14g3984 465 PANTHER CARBOXYPEPTIDASE 8 463 - -
Amo14g3984 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Amo14g3984 465 Pfam Serine carboxypeptidase 41 458 IPR001563 GO:0004185|GO:0006508
Amo14g3984 465 Gene3D - 313 349 - -
Amo14g3984 465 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Amo14g3984 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 463 IPR001563 GO:0004185|GO:0006508
Amo14g3984 465 Gene3D - 360 458 - -
Amo14g3984 465 Gene3D alpha/beta hydrolase 32 292 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3984 Amo-Chr14 145761850 145765068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3984 321 461 Calmodulin-binding Proteins AT2G22960 28.369 4.06e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3984 K16297 - gmx:100805130 810.831