Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3981 ATGGTTTTGGAGGAACGAGTTCTGTTTAACGGCGAACACGACGGAGCCGTCAACGGAGCGCAGCCAGTTTCCGCGGCTCCAGACGGCGGAGATGACGGCAAACCGACGGCGAGGCTGCCGCGGTGGACGCGGCAGGAGATCTTGGTACTAATTCAGGGAAAGACCGACGCCGAAACCAGGTTCCGACCTGGCCGGTCCGCCGTAGGTTCGCCGTCGATCGGTTCGCCGGAGCCTAAGTGGCAGCTGGTATCGTCGTACTGTAAGAAGCACGGCGTGAACCGCGAACCGGTTCAGTGTCGGAAACGGTGGAGCAACCTCGCCGGCGATTACAAGAAGATCAAGGAGTGGGAGTCTAGGGCACGGGATGAAACGGAGTCGTTTTGGGTTATGAGAAACGATATGAGGAGGGAGAGAAAGTTACCGGGGTATTTTGATAAGGAGGTGTATGATATACTTGACGCTGCGGTTTCTCCGGCGTTGGCGGTGATTCCGGCGAGTTCTGCGACGGCGGCGAAGGTGGCGGAGGAAGTGGAAGGTGGTGATGATGCTGAGGTGCACATTTATGACAGTAATAGGAGGGTGAGTGTTGGTGGTGGAGGTGAGGATGGATTATTCTCTGATTCTGAGAGGGACGAGGTTTTTGTTTCTGGGAATAAGAATGTTCCTCATCCTGTTATTCCTATCTCAGCGGAGAAGCAGTATCAACCACCCCTCCAAGGGGAAGGCAATGCTCAAGATGCTACTAATGAGAAACAACCAGCTTCAAATCCGGATTCTACATCTCAAGGAGAACGAAAGAGGAAGCGGTTTTCAGTTGATTCGGAAGAAGAAACTCTGCAGAGTCAACTAATTGATGTGTTAGAAAAAAACGGCAGGATGCTGCGCGATCAACTCGAAGCTCAGAACGTCAATTTCCAATTGGATCGGCAACAGCAGAAAGACACAGCAAGTAACATTGTTGCTGTGCTGGATAAGCTTGCAGATGCTTTAGGAAGAATTGCTGATAAACTATGA 1014 0.5178 MVLEERVLFNGEHDGAVNGAQPVSAAPDGGDDGKPTARLPRWTRQEILVLIQGKTDAETRFRPGRSAVGSPSIGSPEPKWQLVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESRARDETESFWVMRNDMRRERKLPGYFDKEVYDILDAAVSPALAVIPASSATAAKVAEEVEGGDDAEVHIYDSNRRVSVGGGGEDGLFSDSERDEVFVSGNKNVPHPVIPISAEKQYQPPLQGEGNAQDATNEKQPASNPDSTSQGERKRKRFSVDSEEETLQSQLIDVLEKNGRMLRDQLEAQNVNFQLDRQQQKDTASNIVAVLDKLADALGRIADKL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3981 337 MobiDBLite consensus disorder prediction 236 260 - -
Amo14g3981 337 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 12 337 - -
Amo14g3981 337 ProSiteProfiles Myb-like domain profile. 34 107 IPR001005 -
Amo14g3981 337 Gene3D - 42 112 - -
Amo14g3981 337 Coils Coil 295 315 - -
Amo14g3981 337 MobiDBLite consensus disorder prediction 13 39 - -
Amo14g3981 337 MobiDBLite consensus disorder prediction 235 274 - -
Amo14g3981 337 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 12 337 - -
Amo14g3981 337 CDD GT1 40 114 - -
Amo14g3981 337 Pfam Myb/SANT-like DNA-binding domain 41 130 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3981 Amo-Chr14 145741353 145744295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3981 41 115 Trihelix Transcription Factor Family AT1G33240 32.051 5.60e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo14g3981 Myb_DNA-bind_4 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3981 - - adu:107486470 540.036