Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3966 ATGAATTGCGAAAAGCTCAGCAATCCAAGGATGGATAAGAAGAAGAAGCTGAAGCACACGGTGAACAAAGCAAAAGAGGAATCAAGCATGGAAAAGAAGCATCAGAATGGCAAGAGCAAGAGCATTCACCACATCCTCCCTCTTGACCTGATTCACATAATCCTTCTGCGGGTGCCGATCAGACATCTCGCTCGCCTCAGGTGCGTTTCCAAGCTCTGGTGCTCTCTAATTTCTAATCGTGACTTTGCGGAATTGCATTTTCACCATTCTCCCGCTGCCACCAACGCATGCTTCTTCATGAAAAACGACACTATGGCTGACTTGGTCTACTTAGACGACAATGATGCATCACAAAAAGAGGTGTGTCCCCCTTTCCGAAAGAAACCACCTTCTGTTTTTTTGGTCGTAGGATCCTGCAGAGGCTTTATTCTCTTCCATCGAGACCCACATTTTCTTGTGGTATGGAACCCACTCACTGGATCCAGCAAAAGAATATCCTACTCTCATATTGTTCATCGTAGTAAGTCCCCTGTCTATGGCAGGATTGCCTACGGTGTGTATCTGCATGGATTTGGTTATGATGCATCACAGGATGATTACTTACTTCTTGTAGCTTGGTGCGATTGCGAATTACAATATCATTTGGATTGCTTTTCCTTGAGAACCAATTCATGGATTAATCTTGATGCTGCTGTCCCCAATCGCTTGGGTTTTCTTTGCTGGCATTCTGGTGGGTTGTTCTTTAATGGCGCTGTTCATTGGGTGCCTTTCGATCTTAAAGATTACAGGGATGCTATTATTATCTTTGATCTCGTGGAAATGACTTTTTCAACTATATCTGCGCCGGAACAACTGTCAAGCTCTTATACATGTCTTGCCCTACTCGGAGGCTGCCTATCCTTGTATTCTTGCAAGGATGATTGCTATAACACTGACATATGGGTGATGAAAGAATATAAAGTGCACTCATCTTGGACTCTCTATCAGATTCCTTGCAAGTACTTCCGGCCTCTGTGCTTATCTAGTAATAAGGATATTATTGGAAGAGGTTATACTTCATGTGGTAAAACAGGGTACTTCATATATAATGTGAGAGGAGACCTGCTCAAGCATTTTAAAGATCTGTGTTGTCAGCWTCCSAGACGTRAACCCATTATTGTGTATACAGAGAGTCTCTTGCCACTCCCTAGTGACATTAAGGATAAGGATAACAAGAACAAGATGAAGAAGGAAATCCGAAAATTGATCATCATTGGCAACAACTGCCTGCCATTGAGGAAGTCAGAGATTGAATACTATGCTATGTTGGCCAAAGGTTGGAGTTCACCGTTACACAATGGAACTTGGAACATTACTTAG 1359 0.4268 MNCEKLSNPRMDKKKKLKHTVNKAKEESSMEKKHQNGKSKSIHHILPLDLIHIILLRVPIRHLARLRCVSKLWCSLISNRDFAELHFHHSPAATNACFFMKNDTMADLVYLDDNDASQKEVCPPFRKKPPSVFLVVGSCRGFILFHRDPHFLVVWNPLTGSSKRISYSHIVHRSKSPVYGRIAYGVYLHGFGYDASQDDYLLLVAWCDCELQYHLDCFSLRTNSWINLDAAVPNRLGFLCWHSGGLFFNGAVHWVPFDLKDYRDAIIIFDLVEMTFSTISAPEQLSSSYTCLALLGGCLSLYSCKDDCYNTDIWVMKEYKVHSSWTLYQIPCKYFRPLCLSSNKDIIGRGYTSCGKTGYFIYNVRGDLLKHFKDLCCQXPRRXPIIVYTESLLPLPSDIKDKDNKNKMKKEIRKLIIIGNNCLPLRKSEIEYYAMLAKGWSSPLHNGTWNIT* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3966 452 PANTHER OS02G0783600 PROTEIN 43 395 - -
Amo14g3966 452 Pfam F-box domain 46 80 IPR001810 GO:0005515
Amo14g3966 452 Pfam F-box associated 245 327 IPR006527 -
Amo14g3966 452 MobiDBLite consensus disorder prediction 1 37 - -
Amo14g3966 452 TIGRFAM F_box_assoc_1: F-box protein interaction domain 137 330 IPR017451 -
Amo14g3966 452 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 43 395 - -
Amo14g3966 452 MobiDBLite consensus disorder prediction 21 36 - -
Amo14g3966 452 SMART fbox_2 46 86 IPR001810 GO:0005515
Amo14g3966 452 Gene3D - 401 446 IPR029064 -
Amo14g3966 452 SUPERFAMILY F-box domain 44 152 IPR036047 GO:0005515
Amo14g3966 452 SUPERFAMILY Galactose oxidase, central domain 56 367 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3966 Amo-Chr14 145528352 145540399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3966 414 438 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 80.000 2.01e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3966 - - adu:107486475 608.986