Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3947 ATGTCCATTGCTGTGCTGTGTCAGAACTATGCTTCCTCCTCATGGTGCTTAGATGAACTTGTGCAGATCATGAAATGCTCTGACAAAGGAACAACACGACCAGTTTTGCCAACTTTTTATCAAGTGCATCCATCAGATGTGCGGCATCAAAGGAATCAATATGAAAAAGACATGATAAGCCATGAAAACAGATACATCAATGATTTAAACAAAGTAAAAGAATGGAGGTTAGCTTTGTATGAAGTATGCAGTCTAAGTGGAAAACATTGTGGCATGAATAGTGAGATTATCAAGAATATTGTTCAAGAGGTCTCGCAAAAGCTTCCTCCTGAACCACTATACATTAAGCATCCAATTGGTTTTGATTCTCACTTTGAAGCAGTAGAATCACTTTGGAATATGGAATTTGACAATACCATTTGCATGCTGGTCATTTATGGAGATGGTAACAAGACCACATTTGTTTGGGAGTTGTTTAACAAGTTTCAGCATCAATTTGAAGCTGCGAGTTTTCTTGATAAAGTCTCTGAAAAATCAAGAAGTGCTGATGGCCTAGAAAACCTCCAGAACATACTTTTGTATGAGATGGGTGTGCACAAAAAATCTAAGCTGGGAAGCACATTAAAAGGATATTCTTATATAAAACAAACTATCTGCAATAAAAGAATCCTTCTAGTTCTTGATGATGTTGATAGTACAGAACAATTTGATTCATTGGCAGGAGGAGGCGATTGGTTTTGTCCTGGTAGTAGAATTGTTATAACAACAAGAGACGACAATTTCCTAAATAATCAAGTGTTACATGGATTTAAGATTAAGAAATATTGCATTAATGAAGGTGAATTTGAAGGAATGGAAGGTGCTAAATCCAAGATCAAAGTCCTACTACCCTAA 894 0.3624 MSIAVLCQNYASSSWCLDELVQIMKCSDKGTTRPVLPTFYQVHPSDVRHQRNQYEKDMISHENRYINDLNKVKEWRLALYEVCSLSGKHCGMNSEIIKNIVQEVSQKLPPEPLYIKHPIGFDSHFEAVESLWNMEFDNTICMLVIYGDGNKTTFVWELFNKFQHQFEAASFLDKVSEKSRSADGLENLQNILLYEMGVHKKSKLGSTLKGYSYIKQTICNKRILLVLDDVDSTEQFDSLAGGGDWFCPGSRIVITTRDDNFLNNQVLHGFKIKKYCINEGEFEGMEGAKSKIKVLLP* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3947 297 Gene3D - 105 268 IPR027417 -
Amo14g3947 297 Pfam NB-ARC domain 139 266 IPR002182 GO:0043531
Amo14g3947 297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 269 IPR027417 -
Amo14g3947 297 ProSiteProfiles TIR domain profile. 1 108 IPR000157 GO:0007165
Amo14g3947 297 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 87 IPR035897 -
Amo14g3947 297 Gene3D - 1 104 IPR035897 -
Amo14g3947 297 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 273 IPR044974 GO:0006952
Amo14g3947 297 Pfam TIR domain 2 111 IPR000157 GO:0007165
Amo14g3947 297 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3947 Amo-Chr14 145278015 145286579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3947 33 273 WRKY Transcription Factor Family AT4G12020 29.200 1.10e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3947 - - adu:107486187 470.314