Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3940 CTGAGTGAGTTGTACATAACTGAGAACAAGCTAATTTCTGGAGAGGTTCCAACTTGCTTTGGTAATCTTACTTCTCTAAGAAAACTTTACTTGAACTCCAACAAACTCAGTAAGGTGCCTTCTTCTCTTTGGAGCCTCAGAGACATTCTTGAGGTGAACTTGTCTGACAATGCTTTAACTCTGTCTCTTCCAATTGAAATTGGAAACTTAAAGGCTGTGACTTTCTTGGATCTATCAAAGAATATGATCTCAGGAAGCATTCCTGGGGCCATTTCTGGATTGCAAAATTTGCAAATTCTCAACTTATCACAAAATAAATTGGTAGGGGGTATTCCTGATTCACTTGGCAGTTTGATAAGTTTGACAGATTTGGACTTATCTCAAAACAACTTTTTGGAAGGAGAGATTCCGAGTGGTGGACCTTTCAAAAATTTCACTGCTCAATCTTTCATGTTTAATAAAGCACTTTGTGGAAATGCCAGATTACAAGTCCCAACATGCAGTAAAGTAAAGAAGAAAAGGTCAAATGCAAACATATTCTTCATCAAATGCATATTGCCTATAATGGTTTCAATCATTCTGGTTGTTTTCTCATTACAAGCAGCCAGAATGATTTCGTACTATGAACTATCACAGGCAACTAATGGATTTGATGAGAGTAATTTGCTTGGTAGGGGCAGTTTTGGCTGTGTTCAAAGGATCAAAGAGCTTCAGTGTAGAATGCTAGCAATGCGCAATCTGCGCCATCGAAATCTCATGAAGATCATAGGTTGTTGTTCAAGTATAGATTACAAGCTTTTAGTGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAGATGTGGCATCTGCATTGGAGTATCTGCATCATGGATCTTCACCTATAGTGGTTCATTGTGATGTCAAACCTTGTAATGTCTTATTGGATGAAGACATCGTTGGCCATGTCAGTGACTTTGGCATTGCCAAATTGCTTGGCGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACCGGAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGTATACAGTTTTGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTGTCACGTGCAATTGATCGAGTTGTGGATTCCAACTTGTTACAAGATGAAGGTCACCACCATGTTGATGACATAATAGCATCTACATCATCTATCTTGAAACTGGCCTTGAATTGTTGTGAGGATTTACCTGAAGAACGAATGAACATGGAAGATATTGCTGCATCACTGAACAAAGTTAAGGCCAAGTTTCTTAAAGCTAATGACAAGGATGTCGTTCGGTTTTGTAGAAAATGA 1473 0.3876 LSELYITENKLISGEVPTCFGNLTSLRKLYLNSNKLSKVPSSLWSLRDILEVNLSDNALTLSLPIEIGNLKAVTFLDLSKNMISGSIPGAISGLQNLQILNLSQNKLVGGIPDSLGSLISLTDLDLSQNNFLEGEIPSGGPFKNFTAQSFMFNKALCGNARLQVPTCSKVKKKRSNANIFFIKCILPIMVSIILVVFSLQAARMISYYELSQATNGFDESNLLGRGSFGCVQRIKELQCRMLAMRNLRHRNLMKIIGCCSSIDYKLLVMEFMPNGSLERWLYSHNHCLDFLQRLNIMIDVASALEYLHHGSSPIVVHCDVKPCNVLLDEDIVGHVSDFGIAKLLGEGQSKEYTKTMATVGYIAPEFGSKGIISTKGDVYSFGIMLMETFTRKKPTDDLFVAGLSMKGWISESLSRAIDRVVDSNLLQDEGHHHVDDIIASTSSILKLALNCCEDLPEERMNMEDIAASLNKVKAKFLKANDKDVVRFCRK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3940 490 SUPERFAMILY Protein kinase-like (PK-like) 195 469 IPR011009 -
Amo14g3940 490 Gene3D Transferase(Phosphotransferase) domain 1 276 487 - -
Amo14g3940 490 Pfam Protein kinase domain 243 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3940 490 PANTHER RECEPTOR-LIKE PROTEIN 55 244 478 - -
Amo14g3940 490 ProSiteProfiles Leucine-rich repeat profile. 25 46 IPR001611 GO:0005515
Amo14g3940 490 PRINTS Leucine-rich repeat signature 73 86 - -
Amo14g3940 490 PRINTS Leucine-rich repeat signature 94 107 - -
Amo14g3940 490 SMART serkin_6 217 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3940 490 SMART LRR_typ_2 94 118 IPR003591 -
Amo14g3940 490 SMART LRR_typ_2 23 46 IPR003591 -
Amo14g3940 490 SMART LRR_typ_2 70 93 IPR003591 -
Amo14g3940 490 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 244 478 - -
Amo14g3940 490 Pfam Leucine rich repeat 75 131 IPR001611 GO:0005515
Amo14g3940 490 Pfam Leucine rich repeat 1 59 IPR001611 GO:0005515
Amo14g3940 490 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 2 231 - -
Amo14g3940 490 SUPERFAMILY L domain-like 4 157 - -
Amo14g3940 490 ProSiteProfiles Protein kinase domain profile. 217 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3940 490 Gene3D Phosphorylase Kinase; domain 1 236 275 - -
Amo14g3940 490 PANTHER RECEPTOR-LIKE PROTEIN 55 2 231 - -
Amo14g3940 490 Gene3D Ribonuclease Inhibitor 1 176 IPR032675 -
Amo14g3940 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 315 327 IPR008271 GO:0004672|GO:0006468
Amo14g3940 490 Gene3D Phosphorylase Kinase; domain 1 196 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3940 Amo-Chr14 145215750 145217737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3940 12 479 Receptor kinase-like Gene Family AT3G47570 32.881 5.65e-86 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo14g3940 Pkinase 3.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3940 - K13420 aip:107633486 729.554