Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3891 ATGGGGACTCCAAGAGGAAGAGGAAGTGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGTTCTTCTTCTTCCATGTTCTGTTGCATTTTTCTTGTTTTTTAGCACTGCAACTGCTTTGCTTTCTCCCAAAGGAGTAAACTTTGAAGTTCAAGCTTTAATGGGGATAAAGAACTCACTGGTGGATCCTCATGGTGTTTTGGATAATTGGGATGCTGATGCTGTTGATCCTTGTAGCTGGACTATGGTTACTTGTTCTGCAGAAAACTTGGTGATTGGATTGGGTACTCCAAGTCAAAGTTTATCTGGTACTCTTTCTCCAACCATAGGAAACTTAACCAACCTTCAGATTGTGTTGCTTCAGAATAACAACATAACTGGACCAATCCCTTCAGAGTTGGGAAAACTTCCTAAGCTTCAAACTCTTGATCTCTCTAACAACTTCTTCAGTGGTGAAATTCCCCCCTCACTTGGTCACTTGAGAAGTTTGCAATACATGAGGCTCAATAATAATAGTCTTCATGGTGAATTGCCAGAATCATTGGCTAATATGACACAGCTTGCTTTTCTTGACTTGTCCTACAACAATATCAGTGGCCCTATACCAAGAATTTTAGCTAAATCCTTCAACATTGTTGGAAATCCCCTTGTTTGTGCAACTGGAAAAGAACCAAACTGCCATGGCATGACACTGATGCCAATGTCCATGAACTTAAATGGCACTGAAGATGCCTTACCATCAAGCAAACCAAAATCTCATAAAATGGCAATTGCTTTTGGCTTGAGTCTTGGATGTCTCTGCCTCATAGTTCTTGGTTTTGGCCTTGTTCTTTGGTGGAGGCACAAGCACAATCAACAAGCATTCTTTGATGTGAAAGACCGGCATCATGAAGAAGTATACCTTGGAAACTTGAAGAGGTTCCAATTCAGAGAACTCCAAGTTGCTACCAATAACTTCAGCAGCAAGAACATTCTTGGAAAGGGTGGTTTTGGAAATGTCTATAAAGGAGTTCTCTCTGATAGCACTCTTGTAGCTGTCAAGAGGCTGAAAGATGGCAATGCCATTGGAGGAGAGATTCAGTTTCAGACTGAAGTCGAAATGATCAGCCTCGCCGTCCACCGGAACCTCCTCAGACTCTATGGATTCTGCATGACACCAACAGAAAGGCTCTTAGTTTACCCTTACATGTCCAATGGCAGCGTCGCTTCACGTCTAAAGGGTAAGCCGGTGTTGGATTGGGGAACAAGGAAGAACATTGCATTAGGAGCAGCAAGGGGGCTATTATATCTTCATGAGCAATGTGATCCAAAGATAATACATAGGGATGTGAAGGCTGCAAACATATTGCTTGATGACTATTGTGAAGCAGTGGTTGGTGATTTTGGGTTGGCAAAGCTTCTGGATCATCAAGATTCACATGTCACAACTGCAGTTAGAGGCACTGTAGGACACATAGCCCCAGAGTATCTATCTACAGGACAATCATCTGAGAAAACTGATGTGTTTGGATTTGGGATTCTCCTCTTGGAATTGATCACAGGACAAAGGGCACTAGAGTTTGGAAAAGCTGCTAACCAAAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCATCAGGAGAAGAAGCTAGAGTTGCTTGTGGACAAGGATCTTAAAGGGAACTATGACAGGATTGAACTTGAGGAAATGGTTCAAGTGGCATTGTTATGTACTCAAAACCTTCCAGGGCATAGACCAAAGATGTCTGAAGTTGTAAGAATGCTTGAAGGTGATGGATTAGCAGAGAGATGGGAAGCTTCACAAAGAGCTGATACTAGTGCTGCTGCTACTGCTACTACTAACACTTCAAAATCCAAACCTCATGAATCATCTTTATCAGATAGGTATTCTGATCTCACTGATGATTCCTTGTTGTTAGTCCAAGCCATGGAGCTATCAGGACCAAGGTGA 1962 0.4251 MGTPRGRGSGRGRGRGRGRGGGGGVLLLPCSVAFFLFFSTATALLSPKGVNFEVQALMGIKNSLVDPHGVLDNWDADAVDPCSWTMVTCSAENLVIGLGTPSQSLSGTLSPTIGNLTNLQIVLLQNNNITGPIPSELGKLPKLQTLDLSNNFFSGEIPPSLGHLRSLQYMRLNNNSLHGELPESLANMTQLAFLDLSYNNISGPIPRILAKSFNIVGNPLVCATGKEPNCHGMTLMPMSMNLNGTEDALPSSKPKSHKMAIAFGLSLGCLCLIVLGFGLVLWWRHKHNQQAFFDVKDRHHEEVYLGNLKRFQFRELQVATNNFSSKNILGKGGFGNVYKGVLSDSTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKNIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHQEKKLELLVDKDLKGNYDRIELEEMVQVALLCTQNLPGHRPKMSEVVRMLEGDGLAERWEASQRADTSAAATATTNTSKSKPHESSLSDRYSDLTDDSLLLVQAMELSGPR* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3891 653 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 30 653 - -
Amo14g3891 653 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 30 653 - -
Amo14g3891 653 Pfam Leucine Rich repeats (2 copies) 117 157 IPR025875 -
Amo14g3891 653 Gene3D Phosphorylase Kinase; domain 1 292 399 - -
Amo14g3891 653 SUPERFAMILY Protein kinase-like (PK-like) 300 593 IPR011009 -
Amo14g3891 653 SMART serkin_6 323 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3891 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Amo14g3891 653 MobiDBLite consensus disorder prediction 603 633 - -
Amo14g3891 653 MobiDBLite consensus disorder prediction 607 624 - -
Amo14g3891 653 Pfam Leucine rich repeat N-terminal domain 53 90 IPR013210 -
Amo14g3891 653 Gene3D Transferase(Phosphotransferase) domain 1 400 612 - -
Amo14g3891 653 ProSiteProfiles Protein kinase domain profile. 323 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3891 653 Gene3D Ribonuclease Inhibitor 50 232 IPR032675 -
Amo14g3891 653 SUPERFAMILY L domain-like 53 215 - -
Amo14g3891 653 Pfam Protein kinase domain 324 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3891 653 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3891 Amo-Chr14 144404614 144408627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3891 25 653 Receptor kinase-like Gene Family AT5G16000 76.995 0.0 1007
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Amo14g3891 Pkinase 6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3891 - - gmx:100798412 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3891 14 144404614 144408627 Amo14g3891 14 144404614 144408627 ECH
Amo20g3521 20 145463505 145467795 Amo14g3891 14 144404614 144408627 PCT
Amo10g2924 10 94573359 94577649 Amo14g3891 14 144404614 144408627 PCT
Amo14g3891 14 144404614 144408627 Amo20g3521 20 145463505 145467795 PCT
Amo14g3891 14 144404614 144408627 Amo10g2924 10 94573359 94577649 PCT