Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3881 ATGCCTACTCTCCCACCTCTTCTTTCCTTCAATTCTCAGAGTAAACCAATTCAATTCAATTCACCATCATCTTACAAATTAATAAACCTTTTCTCAATTTTTTTTTTAAATCTCCCTCATTATTGCCACACCATGCAAGCCTTAAGGGATGAAATCACAGGCCTTAATAATAATTATTTTCTCCCTTCAGAAACATATAACTATACTACCTCCATGATGCAAAATACCAACAATACCCTTACCTCTTTTCATCCATACAATAACAACAAGAACCAATTCTATAATGGCAATAATAATTTCCTTAATCAAATGCTTTTTCCACCAGAATTTATTCTTGGCAACAATAGTCCTACTCAATCATCATGCATAAGTAGCAACAACTCAACCTCAGATGAAGCAGACGAACAACAACAACAACAACAAAGCCTTATCCTGAACGAGAGGAAACACAGGAGGATGATATCGAACCGGGAATCGGCTCGCCGGTCCCGGATGAGAAAGCAAAAACACCTTGATGAGCTTTGGTCACAGGTTGTTTGGCTGAGGAATGAGAATCACCAATTATTGGACAAATTAAACAATGTTTCAGAGTCACATGATAAAGTTGTTCAAGAGAATGTTCAATTGAGAGAAGAGGCTTCAGAACTTCGCCAAATGCTTTGTGACATGCAGCTACATAGTCCAATTTGCCCTCCTCCTTTGAGTCCTTTTCATCATGATGAAGAAGAAGAAGAAGAATATCTCAACTATGATGATGATTCCTCAAACCAATCCAACACCACAAGTTCTATGAACCTACTCGGATAA 807 0.3767 MPTLPPLLSFNSQSKPIQFNSPSSYKLINLFSIFFLNLPHYCHTMQALRDEITGLNNNYFLPSETYNYTTSMMQNTNNTLTSFHPYNNNKNQFYNGNNNFLNQMLFPPEFILGNNSPTQSSCISSNNSTSDEADEQQQQQQSLILNERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLLDKLNNVSESHDKVVQENVQLREEASELRQMLCDMQLHSPICPPPLSPFHHDEEEEEEYLNYDDDSSNQSNTTSSMNLLG* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3881 268 SUPERFAMILY Leucine zipper domain 148 197 IPR046347 GO:0003700|GO:0006355
Amo14g3881 268 MobiDBLite consensus disorder prediction 117 141 - -
Amo14g3881 268 CDD bZIP_plant_GBF1 149 200 IPR045314 GO:0003700|GO:0006355
Amo14g3881 268 Pfam bZIP transcription factor 148 200 IPR004827 GO:0003700|GO:0006355
Amo14g3881 268 Gene3D - 146 201 - -
Amo14g3881 268 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 146 209 IPR004827 GO:0003700|GO:0006355
Amo14g3881 268 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 151 166 IPR004827 GO:0003700|GO:0006355
Amo14g3881 268 PANTHER BZIP TRANSCRIPTION FACTOR 50 255 - -
Amo14g3881 268 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 50 255 IPR044521 -
Amo14g3881 268 MobiDBLite consensus disorder prediction 232 268 - -
Amo14g3881 268 MobiDBLite consensus disorder prediction 252 268 - -
Amo14g3881 268 SMART brlzneu 144 208 IPR004827 GO:0003700|GO:0006355
Amo14g3881 268 Coils Coil 192 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3881 Amo-Chr14 144299673 144300682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3881 108 230 bZIP Transcription Factor Family AT3G30530 69.841 4.74e-53 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo14g3881 bZIP_1 7.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3881 - - adu:107486353 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3881 14 144299673 144300682 Amo14g3881 14 144299673 144300682 ECH