Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3868 ATGGGTTCATCAATCCTTGGCCCCAAAGAAATTGAGATGTTTGAAGGGCAAGCTTTATTGTATAGACAGTGTTGTGCCTACATAGATTCCATGTGTATTAAGTGGTGTGTTGAGCTCAACATAGCAGACATAATTCACAACCATGGTCAACCCATTACCCTTCATCACTTGGTAAGAATCCATGACGAAAACAAACAAGAGAAGGAAGCATATGGTCTCACCATTGCATCAAAGCTCCTTGTTAGTAGCAATGATTATTGTTTATCTCCAATGGTTAAGTATGCTACTGATCCAGTTACAATGGGTCCACTCAATCAATTGAAGGCATGGATTTATGGGGAAGATAATCTCTCACTATTTGGCATGGCCAAAGGAATGGAATTTTGGGAGTTTCTCAACATAAACCCTAAATATCTGAAGTCCTTCAATGAGGCAATGGCTTGTGACTCTAAAATGATTAACTTGGCATTAAGAAGTTGTGGTTTGGTCTTTGATGGGCTTGAATCCATTGTGGATGTTGGTGGTGGAATTGGAACAACTGCTAAGATTATTAGTGAGGCATTTCCTAAGTTGAAATGCATAGTATTTGATCTTCCCCAGGTTGTGGAAAATTTGTTAGGAACCAATAATTTGAGCTTTGTTGGTGGTGACATGTTCAAATCTATTCCTAAAGCACATGCAGTTCTACTCAAGAATATTATACATGATTGGGATGAGGAAAATTGTGTGAAGATAATGAGAAATTGTAAAGATGCTATTTCCAGCAATGGGAAAAGAGGAAAAGTGATTATTATAGAGTCTGTGATCAATGAAAAGCAGGACAAGCATGAAATCACTGAAATGAAGCTCAAATATGATATATACATGACATGTAACAATGGAGCACAGAAAACTGAAGAAGAATTGAAGAAAATCTTTATAGAAGCAGGCTTTCAAGGGTACAAACTGTTCCCTATAGCTGGAATTGTGTCACTTGTTGAGGTCTATCCTTAA 993 0.3746 MGSSILGPKEIEMFEGQALLYRQCCAYIDSMCIKWCVELNIADIIHNHGQPITLHHLVRIHDENKQEKEAYGLTIASKLLVSSNDYCLSPMVKYATDPVTMGPLNQLKAWIYGEDNLSLFGMAKGMEFWEFLNINPKYLKSFNEAMACDSKMINLALRSCGLVFDGLESIVDVGGGIGTTAKIISEAFPKLKCIVFDLPQVVENLLGTNNLSFVGGDMFKSIPKAHAVLLKNIIHDWDEENCVKIMRNCKDAISSNGKRGKVIIIESVINEKQDKHEITEMKLKYDIYMTCNNGAQKTEEELKKIFIEAGFQGYKLFPIAGIVSLVEVYP* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3868 330 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 86 329 IPR029063 -
Amo14g3868 330 Pfam O-methyltransferase domain 106 312 IPR001077 GO:0008171
Amo14g3868 330 Gene3D Vaccinia Virus protein VP39 82 330 IPR029063 -
Amo14g3868 330 Gene3D - 3 62 IPR036388 -
Amo14g3868 330 Pfam Dimerisation domain 31 60 IPR012967 GO:0046983
Amo14g3868 330 PIRSF O-mtase 2 61 IPR016461 GO:0008168
Amo14g3868 330 PIRSF O-mtase 56 330 IPR016461 GO:0008168
Amo14g3868 330 PANTHER O-METHYLTRANSFERASE 65 329 IPR016461 GO:0008168
Amo14g3868 330 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 330 IPR016461 GO:0008168
Amo14g3868 330 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 65 329 - -
Amo14g3868 330 SUPERFAMILY "Winged helix" DNA-binding domain 12 84 IPR036390 -
Amo14g3868 330 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 3 60 - -
Amo14g3868 330 PANTHER O-METHYLTRANSFERASE 3 60 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3868 Amo-Chr14 144193859 144196235 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3868 1 328 Monolignol Biosynthesis Gene Families AT5G54160 30.663 1.22e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3868 K22588 - gmx:100813225 402.134