Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3867 ATGGATTTACTAAGTGGTCGCAAAGCAAATGAGATTTTTGAAGGGCAAGTTCATGTGTACAAACACATGTATGCTTACTTAGATTCTATGTGCCTTAAATGGTGCATTGAGTTAGAAATACCAACCATAATCTACAACCATGAAAAACCCATCACCCTTCATGAATTGATCTCAATTTTACAAGTTCCACCATCCAAAATTAGTGGTGTGGAGCGTCTTATGCGCCACCTAAGTCACAATGGATTCTTTGATATTGTAACAATCCATGATGATGATGGTGGTGATGAAAACAAAGAAAAAAAAAAAGAAGCATATGCTCTCACTATTGCTTCTGAGCTTCTTGTTAAAGGCACTGAATATTGTTTAACTCCAATGGCTAAGTGTGGTCTTAATCCACTTATGTCAAGTTCTTTTAACTTATTAGGAAAATGGACTTTAGAAGAAAATCTTACTTTATCTGAAATTTCCCTTGGAACAAATCTTTGGGACTTTCTTAGCAAAAACCCTTCAATTTTGACTTCCTTTAATGAGTCAATGGCTAGTGACTCTCAAATGGTGAAGTTGGCATTGAAAGATCATAGTGCTGTTTTTGAAGGGTTGGAATCCATTGTAGATGTTGGTGGTGGAAATGGAACCATATCTAAGATTATTAGTGACATGTTTCCCAAATTGAAGTGCATAGTGTTTGACCTTCCACATGTTGTGGAGAATTTTTCAGGAACCAGCAGCAACAATTTGAGCTTTTGGATTCTACATGATTGGGATGATGAACATTGTGTAAAGATATTGAAGAAATGCAAAGATGCAATTTCAAATAATACTAAAGGAGGAAAAGCAATTGTCATAGATCTTGTGATAAATGAAAAACAAGATGAATTTGGACTTACTCAAATGAAGCTCAGAATGGATATTGCCATGACAACTTTGAATGGAAAGGAGAGAAGTGAAGAGGAATTCAAGAAGCTTTTTTTGGAAGCAGGCTTTCAAGATTATAAAATATTTCCTTTAACCGGAATGTATTCTCTTATTTTGGTTTATCCTTAG 1044 0.3496 MDLLSGRKANEIFEGQVHVYKHMYAYLDSMCLKWCIELEIPTIIYNHEKPITLHELISILQVPPSKISGVERLMRHLSHNGFFDIVTIHDDDGGDENKEKKKEAYALTIASELLVKGTEYCLTPMAKCGLNPLMSSSFNLLGKWTLEENLTLSEISLGTNLWDFLSKNPSILTSFNESMASDSQMVKLALKDHSAVFEGLESIVDVGGGNGTISKIISDMFPKLKCIVFDLPHVVENFSGTSSNNLSFWILHDWDDEHCVKILKKCKDAISNNTKGGKAIVIDLVINEKQDEFGLTQMKLRMDIAMTTLNGKERSEEEFKKLFLEAGFQDYKIFPLTGMYSLILVYP* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3867 347 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Amo14g3867 347 Pfam O-methyltransferase domain 249 329 IPR001077 GO:0008171
Amo14g3867 347 Pfam O-methyltransferase domain 155 237 IPR001077 GO:0008171
Amo14g3867 347 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 345 IPR029063 -
Amo14g3867 347 PANTHER O-METHYLTRANSFERASE 248 346 IPR016461 GO:0008168
Amo14g3867 347 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 248 346 - -
Amo14g3867 347 PIRSF O-mtase 1 245 IPR016461 GO:0008168
Amo14g3867 347 PIRSF O-mtase 246 347 IPR016461 GO:0008168
Amo14g3867 347 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 347 IPR016461 GO:0008168
Amo14g3867 347 Gene3D Vaccinia Virus protein VP39 115 247 IPR029063 -
Amo14g3867 347 Gene3D Vaccinia Virus protein VP39 248 347 IPR029063 -
Amo14g3867 347 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 4 241 - -
Amo14g3867 347 SUPERFAMILY "Winged helix" DNA-binding domain 10 117 IPR036390 -
Amo14g3867 347 PANTHER O-METHYLTRANSFERASE 4 241 IPR016461 GO:0008168
Amo14g3867 347 Gene3D - 3 114 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3867 Amo-Chr14 144180577 144182701 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3867 30 333 Monolignol Biosynthesis Gene Families AT5G54160 29.448 8.99e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3867 K22588 K13262 gmx:100813225 419.468