Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3833 ATGAGGCTTGTCATAATAATACCTCTCTGTGTTATTGTTCTGTTCTCTTATGCAGCTGCATATGATCCTTTGGATCCAAATGGAAACATAACAATCAAATGGGATGTTATGTCTTGGACACCAGACGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTTCCGGCACATCCCGAATCCGGGATGGACCCTAGGATGGTCATGGGCAAAGAAAGAGGTTATATGGACCATGGTAGGAGCTCAAACAACAGAGCAAGGAGATTGTTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCAACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAATCAGCAATACTCAAACTGCTGCAAGGGTGGAGTGGTTTCAGCATGGGGCCAAGATCCTTCGAGCGCTGTCTCCGCCTTCCAAGTCAGTGTTGGACAAGCTGGCACCTCCAACAAGACAGTTAAACTCCCCAAGAACTTCACTCTCTTGGCTCCAGGACCTGGCTATACCTGTGGCCCTGCCAAGGTTGTTCCCTCCACTGTTTTCCTTACACAAGATAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACCTGCACATACTCGCAATTTCTGGCTAGAAAGAACCCGAGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAAACCATTACTTCTTGTCCTACTTGTGCCTGTGGTTGCCAAAACAAGAAGAATTGTGTCAAGAGTGACTCGAAATTCCTCAACACACCCGGCGCTCACACTCCAAAGAGAGACAATGATCCATTGCTGCAGTGCACTCATCATATGTGTCCAATCAGGGTACACTGGCATGTGAAGCTCAACTACAAGGACTACTGGCGAGTCAAGATCGCCATAACGAACTTCAACTATAGAATGAACTACACCCTCTGGACTCTCGCCGTCCAGCATCCGAATCTCAACAATATCACCCAAGTTTTCAGTTTTGATTACAGGCCAATTCTTCCCTATGTGTCCATCAATGATACTGGTATGTTCTATGGCATGAAATTCTATAATGATCTATTAATGGAAGCTGGACCAAGTGGGAATGTTCAATCCGAAGTGCTTCTTCGAAAGGATCAGGATACCTTCACGTTCAAGCAAGGATGGGCGTTTCCTCGCAAGGTTTACTTCAATGGGGAAGAATGCATGCTTCCACCACCAGATACCTACCCATTCCTCCCCAATGCTGCTCCTGTAAAGCTACTTAACTTAACATCACTCATTTTCTTCTTGATTCTCTTGCTTGTAGCTTAG 1296 0.4545 MRLVIIIPLCVIVLFSYAAAYDPLDPNGNITIKWDVMSWTPDGYVAVVTMSNFQMFRHIPNPGWTLGWSWAKKEVIWTMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQYSNCCKGGVVSAWGQDPSSAVSAFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTQDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITSCPTCACGCQNKKNCVKSDSKFLNTPGAHTPKRDNDPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRMNYTLWTLAVQHPNLNNITQVFSFDYRPILPYVSINDTGMFYGMKFYNDLLMEAGPSGNVQSEVLLRKDQDTFTFKQGWAFPRKVYFNGEECMLPPPDTYPFLPNAAPVKLLNLTSLIFFLILLLVA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3833 431 Pfam COBRA-like protein 44 207 IPR006918 GO:0010215|GO:0031225
Amo14g3833 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Amo14g3833 431 PANTHER PROTEIN COBRA 4 429 IPR006918 GO:0010215|GO:0031225
Amo14g3833 431 PANTHER COBRA-LIKE PROTEIN 4 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3833 Amo-Chr14 143818729 143820682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3833 9 430 COBRA Gene Family AT3G02210 65.138 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3833 - - gmx:100783410 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3833 14 143818729 143820682 Amo14g3833 14 143818729 143820682 ECH
Amo20g3493 20 144917049 144919655 Amo14g3833 14 143818729 143820682 PCT
Amo10g2767 10 92484344 92487546 Amo14g3833 14 143818729 143820682 PCT
Amo14g3833 14 143818729 143820682 Amo20g3492 20 144913608 144916837 PCT
Amo14g3833 14 143818729 143820682 Amo10g2943 10 94852241 94853330 PCT