Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3827 ATGGCTAATAAAAGAGTGAAGGTGATAGAACAGTGTCAAATTGGTCCTCCACCAGGTTCGGTTTCTTCAACTTCTATTCCCCTTACATTCTTTGATATTCCATGGCTTTGTTGCCCTCCAATCAAACGCGTTTTCTTCTATGAATTCCATTATCCCAAATCACACCTCTTACAAGAAGTGATTCCAAATCTGAAACAATCACTTCCACTCACTCTCAAACACTTCTTCCCTTTCTCTTCCAACATAGTTTTCCCTCCAAAGCCACAAACCCCACACATTCTCTACAAAGAAGGTGACACTCTTCCCTTCATAGTTGCTGAGTCCACAACAACAAATCTCAACAACCTCGTATCTGACTCACCAAGAGATGTCACGTGCTTGCACCCTTTTGTTCCTGTTTTGCCCTCACCACGTGCCTTGGAAGAAGATGAAAGTGGAACCTTGTTGATTTCTCCTATGGCCATTCAGGTAACTATCTTCCCCAACTCCGGCTTAGCCATATGCATTACTTTCAGACACGTGGTTGCTGATGGGAGAGCGTTTCATCACTTCATGAAGTTTTGGGCCTCGATTTGTGGGCCTAAAGTGGGCCTTGATTTACCATTGCTTGATAGGAACATGATCCAAGACCCAAATGGGCTCAGGCCCATTTTCCTAGAAGCTATTTGGAATATCCCGATTAAAACCGTGGAATCCACAGGCCAAGTTAATAATGTTCCTAGTGACATGGTGAGGCGCACGTTTGTGGTGAGGAATGAGCATGTTGAGAATTTGAAGAAATATGTGACTACTAAATGCCAAAACCATGGTCTAGAGACATTGCATGTTTCGACATTTGTGGTGACATGTTCTTTGATTTGGGTTTGTAAGGTGAAGTCAGAAAATAATACCAAAGATGATGATGAATTACATATCTTGGCAATTATGGCAGATTCTCGTAACCTTCCTCAATTTTCAATTCCATTAACATACTTTGGTAATTGTGTGGTTTGTGGCAATGCAAAAATTACTAAGAGCAAATTAGTGGGGCAAAATGGTATTTTTGAAGCTGCCATTGCTATTGGAAGCAAAATTAGATGCTTGCAATATGAAGGTTATAAAGGAGCTGAAACATTAATGTCAAATTTTACTGAGTTTGCTACATTGGGGAAGCATATGTTATTAACTGCTGGTTCACCAAAGTTGGATGTGTATGAAACTGATTTTGGGTGGGGGAAGCCTAAGATGAGTGAAGTAGTTCAAGTAGAGTCTTCAATGTCAGTTTCACTATCTGATTGCAAGGGCAAAGGTGGAATTGAAGTTGGGATAGCACTTGGAAGGACTCAAATGATGAAATTCAATACCCTCATGGAAGAGTTCCTTGAAGAAATTGCAGTTCATGATTCATGA 1389 0.4068 MANKRVKVIEQCQIGPPPGSVSSTSIPLTFFDIPWLCCPPIKRVFFYEFHYPKSHLLQEVIPNLKQSLPLTLKHFFPFSSNIVFPPKPQTPHILYKEGDTLPFIVAESTTTNLNNLVSDSPRDVTCLHPFVPVLPSPRALEEDESGTLLISPMAIQVTIFPNSGLAICITFRHVVADGRAFHHFMKFWASICGPKVGLDLPLLDRNMIQDPNGLRPIFLEAIWNIPIKTVESTGQVNNVPSDMVRRTFVVRNEHVENLKKYVTTKCQNHGLETLHVSTFVVTCSLIWVCKVKSENNTKDDDELHILAIMADSRNLPQFSIPLTYFGNCVVCGNAKITKSKLVGQNGIFEAAIAIGSKIRCLQYEGYKGAETLMSNFTEFATLGKHMLLTAGSPKLDVYETDFGWGKPKMSEVVQVESSMSVSLSDCKGKGGIEVGIALGRTQMMKFNTLMEEFLEEIAVHDS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3827 462 Pfam Transferase family 6 452 - -
Amo14g3827 462 Gene3D - 5 234 IPR023213 -
Amo14g3827 462 PANTHER - 4 459 - -
Amo14g3827 462 Gene3D - 239 456 IPR023213 -
Amo14g3827 462 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 4 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3827 Amo-Chr14 143790779 143792298 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3827 116 457 Monolignol Biosynthesis Gene Families AT5G48930 24.377 5.70e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3827 - - gmx:100782335 597.816