Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3825 ATGGAGAAGAAGGTGAAGCATGATGACAGAGTGAAGGTGATAGAGCAGTGTCAAGTAGGTCCTCCACCAGGTTCTGTTCCTCCAACCTCTGTTCCCCTTACTTTCTTTGATGTTCCTTTTTTATGCTTGCCTGTAACATGCAAACGCATTTTCTTCTATGAAATCCCTTACTCCACAACACACTTCTTACAAGAAGTGATTCCAAATCTGAAACAATCACTTTCACACACTCTCAAACACTTCTTTCCTTTCTCTTCCAACATAGTTTTCCCTCCAAAGCTACAAACCCCTCACATTCTCTATTCAGAAGGTGACACTCTCACTTTCGTAGTTGCTGAGTCCACGACAGCAAATCTTGACAGCCTCGTATCTGACACACCGAGAGATGTCACGTGTTTGCATCCCTTTGTTCCTATGTTGCCTTCTCCACGTGCCTTAGAGGATGACACCTTGTTGATACCTCCTATGGCTATTCAAATCACTATCTTCCCCAACTCTGGCTTCACTATATGCATCAATTTCTGTCACGTGGTGGTGGATGGGAAGGGATTCCATCACTTCATGAAGTTTTGGGCATCAGTTTGTGGGTCTAAAGAGAACATTGTTACTTTGCCAATCCATGATAGAGATATGATTGAAGATCCAAATGGGCTTAAGCATATATTCTTAGAAACAGTGTGGAATTCTACAAGAGAAAGGTTCATGAGTCTTGGCCACAATGTTCCTAGTGACAATGTTCGCCGCACGTTTGTGCTGAGGCGTGACCATGTTGATCATTTGAAGAAATATGTGTCTACTAAGTGCCAAAGCCATGGTCTAGGAACATTACATTTGTCAACATTTGTTGTGACATGTTCTTTGATTTGGGTTTGTAAGGTAAAATCCCAAGATATTGTAAGTAATGATGATGACGAATTATACATATGTCCTTGGTTAGATTGCCGTAACATTGGTGAGTTGGAAATTCCCTCAACGTACTTTGGAAATTGTTTGGTTAATGGCATTGTTGCATTCAAGAGGAGCAAGCTAGTGGGGCAAAATGGTATTTTTGAAGCAGCTGTTGCTATTGGGAGCAAAGTTAGAGAATTGCAATCTGAACCTTATAAATGTGCTGGAACATTTATGTCAAGTTTTAGTAAATGGTCGCATCGTATGTTGGGAATTGCAGGTTCTCCAAAGTTGGATGTGTACGAGACTGATTTTGGATGGGGAAAACCCAAATTGAGTGAAGTAGTTCAACTAGATTCTCAGTTGGTGTCCCTCTCTGATTGTAGGGACAAAGAAGATGGAATAATTGAAGTTGGTGTAGCACTTGGGAGGACTCAAATCCATAAATTCAACACCATTTTAGAAGAGCTTCTTGCAAACATTGCAGTTTGTGACTAA 1386 0.4091 MEKKVKHDDRVKVIEQCQVGPPPGSVPPTSVPLTFFDVPFLCLPVTCKRIFFYEIPYSTTHFLQEVIPNLKQSLSHTLKHFFPFSSNIVFPPKLQTPHILYSEGDTLTFVVAESTTANLDSLVSDTPRDVTCLHPFVPMLPSPRALEDDTLLIPPMAIQITIFPNSGFTICINFCHVVVDGKGFHHFMKFWASVCGSKENIVTLPIHDRDMIEDPNGLKHIFLETVWNSTRERFMSLGHNVPSDNVRRTFVLRRDHVDHLKKYVSTKCQSHGLGTLHLSTFVVTCSLIWVCKVKSQDIVSNDDDELYICPWLDCRNIGELEIPSTYFGNCLVNGIVAFKRSKLVGQNGIFEAAVAIGSKVRELQSEPYKCAGTFMSSFSKWSHRMLGIAGSPKLDVYETDFGWGKPKLSEVVQLDSQLVSLSDCRDKEDGIIEVGVALGRTQIHKFNTILEELLANIAVCD* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3825 461 Pfam Transferase family 26 451 - -
Amo14g3825 461 Gene3D - 10 237 IPR023213 -
Amo14g3825 461 Gene3D - 241 456 IPR023213 -
Amo14g3825 461 PANTHER - 9 459 - -
Amo14g3825 461 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 9 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3825 Amo-Chr14 143780440 143782046 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3825 50 453 Monolignol Biosynthesis Gene Families AT5G48930 20.665 1.80e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3825 - - gmx:100782335 529.635