Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3820 CTTAGTAAACGCCTAGATCTGAAAGATAACACTAGCCATGGTAAATTTATCCGCAGCAATCAAGGAAGTTCATCTGCATATTCCAAGAGACAGAAAAATTATCTGGGGATAATGCTTGGCAAATATTTGAGCTTCTGCCATTCAGAGGATGCAAGTTCATCTCAGAAATGCTATCTAACAGTGATTGAAGAGCTATGCCCCCAATTTTCTCTTGCTGATCTTAGGAAATCAACCAACAACTTCGATGAAAACCAAGTAACTAGAAGATCAGTATTTAACACAGTATACAAAGGTTGTCTCAAACATAATGGTGTGACTGATTATGCAGTGACATTGAAGAGGTTGAAAAGTAAATCTGACCAATGGAAGTTCAGGAAGGAAATTGAGTTCCACTGCCAGCTCTCTCATCCTAATTTGGACTCTCTTATAGGATTCTGTGACCACAAAGAAGAGAAGATTCTTGTGTATGAACACATGTCCAATGGCTCTCTCTATGATTGCTTGTGTTCCAAGGATTTCGAGCTACTTTCATGGAAGAAAAGGCTAGAAATATGCATCGGAGCAGCGCGTGGGCTACACTACCTTCACACAGGAGCCAAGCGCTCTATCTTTCACTGTGATATCAAACCTCAAAATATTCTTTTGGATAGCAACATGGTACCAAAACTCTCACATCTTGGATTTTCCTTACAAGGTCCATTATTAAGGTCAAAGGCAAAGCCTATAAAAGTGGACATGATGATTGGTACACCTGGTTTCATGGCACCTGAGTATGTCCTAACCAAAACCTTCACAGATAAATGTGATGTTTATTCCTTTGGGATAGTTTTAATGGTAGTTTTATCCACTAGCCACAAGCAGAGCTTCTTTGAGAAGATGTACATGATGGCCGACTCAGATTTGTTTTTAGAAGAGCCATTGTCTTTAATGACTCCATATGTGGATATACCTAGCTTTTTGGAGAGGATTTCGGTTGGTGAGATTATTGATCCAGTGTTATTGGGAAAGATTGCACCAGAATGTTTGGGAGTATTCATAGATATCACAAAAAGATGCTTAAGTAAAGATGCAAATGAAAGACCAGATATGGTGTCTCAAATTGTCATAATGGTTCTTAAATGTTTATGCTTTGGTGATTGGAAGAAGGGGAATGCAAGTTGTTCATCTAAGAAACAATATCCAACAGTAATAGAAGAGCTATGCCATCCCTTTTCCTTTCATGATCTTAGAAAGTCAACCAACAACTTTGACCAGAAACTAATAATTGGGGAAAGAGCCCTTAATAAGGTGATGACTGTTCCCCTTGAATTCAAGAAGGAAGTCGAGATGCTATGTCAGCTTCATCACCCAAATATAATATCTCTTATAGGCTTCTGCCACCATGGAAAGGAAAAGATTGCTGTGTACGAGTACACAGACAATGGAACACTCCATGATTACTTGAATAACAAGGACAAAGAACCACTGTCATGGAAGAAAAGACTAGACATCTGCATCGGAGTAGCACGTGCTCTACACTACCTTCACTCTGGAGTTAAGCGTGCAGTCTTTCATCGTGACATAAATCCAATTAATATTCTTTTGGATAGGAATATGATGCCCAAACTTGCCAATTTTGTGATATCATTGCAGGGAGGGCTCTCTACATTGAAGCCAAAGCAAATCAAAGTAGATAAGATTGTAGGTACATCTGCATTGATGGCTCCGGAGTATGCTATACACGGTATTGTTACTGATAAATGTGATGTTTACTCCTTTGGTTTGGTTCTACTACACATGGTAGGCCATAATGTGTTGAACTACTTAATTCAACATGAAGAGTACATTCTTGAGGAGACACTAGATCCAATTCTGAAAGGAAAGATTGCGCCAGAATGTTGGCAAGTATTCACTAGTGTCATACAAAGTTGCTTGGAGTATGAAGCAGATGAGCGACCAACAATGGGGGAAGTAGAGGTATTGCTTGAGCATGCTCTCTCGTTGCAGCAACAAGCTGATATTATAAGGAATGCTGCTTGCTATACCTTATCATCCACTACCCCTTGTTATTGTCGACAGCGATATAATAATCATGAATCACTACCCAGATAG 2091 0.3936 LSKRLDLKDNTSHGKFIRSNQGSSSAYSKRQKNYLGIMLGKYLSFCHSEDASSSQKCYLTVIEELCPQFSLADLRKSTNNFDENQVTRRSVFNTVYKGCLKHNGVTDYAVTLKRLKSKSDQWKFRKEIEFHCQLSHPNLDSLIGFCDHKEEKILVYEHMSNGSLYDCLCSKDFELLSWKKRLEICIGAARGLHYLHTGAKRSIFHCDIKPQNILLDSNMVPKLSHLGFSLQGPLLRSKAKPIKVDMMIGTPGFMAPEYVLTKTFTDKCDVYSFGIVLMVVLSTSHKQSFFEKMYMMADSDLFLEEPLSLMTPYVDIPSFLERISVGEIIDPVLLGKIAPECLGVFIDITKRCLSKDANERPDMVSQIVIMVLKCLCFGDWKKGNASCSSKKQYPTVIEELCHPFSFHDLRKSTNNFDQKLIIGERALNKVMTVPLEFKKEVEMLCQLHHPNIISLIGFCHHGKEKIAVYEYTDNGTLHDYLNNKDKEPLSWKKRLDICIGVARALHYLHSGVKRAVFHRDINPINILLDRNMMPKLANFVISLQGGLSTLKPKQIKVDKIVGTSALMAPEYAIHGIVTDKCDVYSFGLVLLHMVGHNVLNYLIQHEEYILEETLDPILKGKIAPECWQVFTSVIQSCLEYEADERPTMGEVEVLLEHALSLQQQADIIRNAACYTLSSTTPCYCRQRYNNHESLPR* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3820 696 Gene3D Phosphorylase Kinase; domain 1 42 158 - -
Amo14g3820 696 SUPERFAMILY Protein kinase-like (PK-like) 59 364 IPR011009 -
Amo14g3820 696 ProSiteProfiles Protein kinase domain profile. 81 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3820 696 Gene3D Transferase(Phosphotransferase) domain 1 159 376 - -
Amo14g3820 696 Gene3D Transferase(Phosphotransferase) domain 1 474 676 - -
Amo14g3820 696 PANTHER OS07G0166700 PROTEIN 387 677 IPR045272 GO:0004714|GO:0006468
Amo14g3820 696 PANTHER TYROSINE KINASE FAMILY PROTEIN 51 363 - -
Amo14g3820 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Amo14g3820 696 Gene3D Phosphorylase Kinase; domain 1 421 473 - -
Amo14g3820 696 PANTHER TYROSINE KINASE FAMILY PROTEIN 387 677 - -
Amo14g3820 696 Pfam Protein tyrosine and serine/threonine kinase 436 652 IPR001245 GO:0004672|GO:0006468
Amo14g3820 696 ProSiteProfiles Protein kinase domain profile. 395 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3820 696 SUPERFAMILY Protein kinase-like (PK-like) 392 651 IPR011009 -
Amo14g3820 696 SMART serkin_6 416 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3820 696 SMART serkin_6 81 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3820 696 Pfam Protein kinase domain 92 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3820 696 PANTHER OS07G0166700 PROTEIN 51 363 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3820 Amo-Chr14 143732764 143736670 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3820 383 673 Receptor kinase-like Gene Family AT3G51550 34.251 1.06e-52 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo14g3820 Pkinase 6.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3820 - - ahf:112797906 700.279