Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3817 ATGGGTGTTCTTTCAGTTTTGTCTTGTTTCATTAAACCATCTTCTGATTCTAATTCAACACTCATGTCAGCAAAACCACCTTCATCCATTGTAAATGAACTTTGCCATCAGTTTTCTCTTGCAGAGATACAAGCAGCAATAGCAAGAAATCCCAACGAGTTTTCGAAACTAGGACAACCCCGTGGATTAAAGAATGTTTTCAAAGGTTATCTGCAGAATAGTAATATCCCAATTGCCATCAAGAGGTGCAGCATTGGATCATTTTCACAGCAGCTGTTCTCAGAGTTCAAGAATGAGATTGTCTTGCTTTGTCAGCTGCACCATCCTAATCTCATGCCTCTAACCGGATTCTGTATCGAAAGAAACGAGTTGATTATCGTGTATGAATACATGTCTAATGGCTCCCTTGTTGATCATCTTCATCATATAAACCATGATCCACTTTCATGGAAGAGGAGGCTTCAAATTTGCATAGGTGTGGCTCGTGGACTTCACTATCTTCACACTGGAGCCAAGCATGTTATCATCCACCGCCACATTAAGACAAGTAACATTCTTTTGGATGATAACTGGGAGCCTAAAGTTTCAGGTTTGTCACTGTCCAAAAGGGTTCCTCTTAGTATCTCAAAGTCATTGATTAGAGTGGAGTCAGATGTAAAAGGAACATTTGGATATCTTGATCCAGAATATGTAAGAACCGGAGTGCTTACTGAAAGATCAGATGTATTTTCATTCGGTGTAGTTTTGTTAGAGGTTGTGAGTACAAGAACAATACAAAAGGAACGTTTGTATAACCAGATTCATTCAATGAAATCATATGCAGAGGAAATTGTTGATCCATTTCTCAAGTCAAAGATTGATTCAGATTGTTGGAGAACTTTTGTTGACATCACTGAGAGATGTTTGGCTGAAGATGGAAGGGATAGGCCAGACATGGGGGAAGTGGACTTGTCTTGTTTCGGTGACTCAAGTCAAAGGGTGACAAATCCATCTTCTTCTGATCCCACACTCATCTCAACAGAACCACCTTCATCTATCATAACTGAACTCTGCCATCAGTTTACACTTGCAGAGATACAATCAGTAACAAGAAACTTCGAGAAGTCTTTGGGAGAAAGCAGGTTTGGTATTGTTCACAGAGGCTATGTAGGAAATACTTCTAAACCGGTTGCAGTCAAGCAGTATAAGAAGGACTCAGGTTTTGGTTTCTTGGAGTTCAAGAATGAGGTTGTCTTGCTTTCGCAGCTGCACCACCCCAACCTCATCTCTTTGGTTGGGTTTTGCGTCGAAAGAAATGAGTTAATTCTTGTAAATGAGTTGCTTCCTAAGGGTAATCTTTATCATCATCTTCATGGTCGAAACATTCATCCACTTCCATGGAAGAGGAGGCTACAGATTTGCATAGGCGTGGCGCGTGGACTTCATTATCTTCACACTGGAGCCAAGTATACTATCATTCACCGCGACATTAAGACAAATAACATTCTTTTGGATGATAACTGGGAGCCTAAAATTTCAGGTTTAACACTGTCCAAAAGGGTATCTCTTAGGAGCTCAAAGTCATTGAAAAGGACTGAGTCAGATATAAAAGGAACATATGGATATAAAGATCCAGAGTATGAAAGAACTGGGGTGCTGACTGAAAAATCAGATGTATATTCTTTTGGGGTAGTTCTGTTAGAAGTTGTGAGTGCAAAGCCGCCACGGGAGATTTACAGGGAATACTTGGAAGACTGCAATCAGTCTCTCGAGTCATATGCAGAGAAAAATGTTGATCGATTTCTTAAGTCAAAGATTGATCCAGATTGTTGGAAAATATTTGTTGACATCACTGAGAGATGCTTGCTTGCAGAGGGGAGGGAGAGGCCAGACATGGGGGAAGTGGAGGTGGAGCTTCAACATGCACTGCAATTTCAGGAGGAAGCTGATAGAATATGA 1938 0.4066 MGVLSVLSCFIKPSSDSNSTLMSAKPPSSIVNELCHQFSLAEIQAAIARNPNEFSKLGQPRGLKNVFKGYLQNSNIPIAIKRCSIGSFSQQLFSEFKNEIVLLCQLHHPNLMPLTGFCIERNELIIVYEYMSNGSLVDHLHHINHDPLSWKRRLQICIGVARGLHYLHTGAKHVIIHRHIKTSNILLDDNWEPKVSGLSLSKRVPLSISKSLIRVESDVKGTFGYLDPEYVRTGVLTERSDVFSFGVVLLEVVSTRTIQKERLYNQIHSMKSYAEEIVDPFLKSKIDSDCWRTFVDITERCLAEDGRDRPDMGEVDLSCFGDSSQRVTNPSSSDPTLISTEPPSSIITELCHQFTLAEIQSVTRNFEKSLGESRFGIVHRGYVGNTSKPVAVKQYKKDSGFGFLEFKNEVVLLSQLHHPNLISLVGFCVERNELILVNELLPKGNLYHHLHGRNIHPLPWKRRLQICIGVARGLHYLHTGAKYTIIHRDIKTNNILLDDNWEPKISGLTLSKRVSLRSSKSLKRTESDIKGTYGYKDPEYERTGVLTEKSDVYSFGVVLLEVVSAKPPREIYREYLEDCNQSLESYAEKNVDRFLKSKIDPDCWKIFVDITERCLLAEGRERPDMGEVEVELQHALQFQEEADRI* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3817 645 Gene3D Phosphorylase Kinase; domain 1 14 130 - -
Amo14g3817 645 ProSiteProfiles Protein kinase domain profile. 52 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3817 645 PANTHER OS07G0166700 PROTEIN 26 317 IPR045272 GO:0004714|GO:0006468
Amo14g3817 645 PANTHER OS07G0166700 PROTEIN 334 643 IPR045272 GO:0004714|GO:0006468
Amo14g3817 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Amo14g3817 645 SUPERFAMILY Protein kinase-like (PK-like) 334 628 IPR011009 -
Amo14g3817 645 Pfam Protein tyrosine and serine/threonine kinase 366 630 IPR001245 GO:0004672|GO:0006468
Amo14g3817 645 Pfam Protein tyrosine and serine/threonine kinase 65 315 IPR001245 GO:0004672|GO:0006468
Amo14g3817 645 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 26 317 - -
Amo14g3817 645 ProSiteProfiles Protein kinase domain profile. 364 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3817 645 SMART serkin_6 364 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3817 645 SMART serkin_6 65 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3817 645 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 334 643 - -
Amo14g3817 645 Gene3D Phosphorylase Kinase; domain 1 351 440 - -
Amo14g3817 645 Gene3D Transferase(Phosphotransferase) domain 1 441 644 - -
Amo14g3817 645 Gene3D Transferase(Phosphotransferase) domain 1 131 329 - -
Amo14g3817 645 SUPERFAMILY Protein kinase-like (PK-like) 65 315 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3817 Amo-Chr14 143657772 143660066 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3817 313 643 Receptor kinase-like Gene Family AT3G51550 43.605 5.42e-78 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo14g3817 PK_Tyr_Ser-Thr 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3817 - - adu:107486248 625.165