Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3798 ATGAGCATCAACCACAAAGATAAAAAAGACCAGCAGAATCAAAACTGTTCACAAAAGAGTTATGACTTCAAACAATGGGCGCAGCGCAAGGAGAGCTTCAAAGCTCAAGCACTTGTTTATAGGCACATGTTTAGCATTCTAGACCCCATGTGTCTCAAGTGGATTATTGATTCTCGCATACCAAATATAATCCACGACCATGGAAAACCCATTACTCTTTCAGAATTGGTCTCCTCTCAAAATTCCACAAAGGTTAGAATCCATGATGGCAATGAAGAAGAAGAAAAGGAAGCATTTGCTCTCACAGCAGCATCAGAACTCTTGATCAAAGGCACTGAAAACCCTTGTATAGCTCCATTGGTTGAGTTCGTTATGGATCCACTTATTTCAGATTCCTTTAATTATCTGAGCAAGTGGTTTTCCGACGAAGATCGCCGTCTATACGAGATCACCTTGGGGAAACCTTTGTGGGAGTATCTTGACAAGAATCCTAGACTCTTGGGTTTGTTTAATGACGCTATGGCCGGTGATTCTCAGATGATAAAGTTGGCACTAAAGGATCACAACATGGTCTTTGAGGGGTTGGAAACAATTGTGGATGTTGGTGGTGGAAATGGAACCACAGCTCTAATTATCAGTGAGAAATTTCCAGCACTCAAATGTATAGTATTTGATCTTCCAATGGTTGTGGAAAGTTTGAAGGGATTCAACAATTTGAGCTTTGTTGGTGGAGACATGTTTGATTCCATTCCTAAGGCTGATGCAATTCTACTTAAGCTAGTCTTACATAATTGGAGTGACGACAATTGCATAAAAATATTGAAAAATTGTAAAGATGCTGTTAAGGTTTCAAGCAAGAGTAAAAAAGGTAAAATAATAATTTTAGAGACAGTGATAAATGAAGAACAAGATGAACCTGAAATTACTCGACTCAAATATCTTATGACATTAAATATGCAAATTATTCACGGAAGAGAGAGAACCAAAGAAGAATGGAAAAATATCTTTTATGAAGCTGGCCTCTATAATTACAAGATATTTCCATTTACTGGATATTTATCACTTATAGAAGTCTATCCTTAA 1083 0.373 MSINHKDKKDQQNQNCSQKSYDFKQWAQRKESFKAQALVYRHMFSILDPMCLKWIIDSRIPNIIHDHGKPITLSELVSSQNSTKVRIHDGNEEEEKEAFALTAASELLIKGTENPCIAPLVEFVMDPLISDSFNYLSKWFSDEDRRLYEITLGKPLWEYLDKNPRLLGLFNDAMAGDSQMIKLALKDHNMVFEGLETIVDVGGGNGTTALIISEKFPALKCIVFDLPMVVESLKGFNNLSFVGGDMFDSIPKADAILLKLVLHNWSDDNCIKILKNCKDAVKVSSKSKKGKIIILETVINEEQDEPEITRLKYLMTLNMQIIHGRERTKEEWKNIFYEAGLYNYKIFPFTGYLSLIEVYP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3798 360 Gene3D - 23 108 IPR036388 -
Amo14g3798 360 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 30 359 - -
Amo14g3798 360 PIRSF O-mtase 17 88 IPR016461 GO:0008168
Amo14g3798 360 PIRSF O-mtase 82 360 IPR016461 GO:0008168
Amo14g3798 360 PANTHER O-METHYLTRANSFERASE 30 359 IPR016461 GO:0008168
Amo14g3798 360 CDD AdoMet_MTases 197 280 - -
Amo14g3798 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 360 IPR016461 GO:0008168
Amo14g3798 360 Gene3D Vaccinia Virus protein VP39 111 360 IPR029063 -
Amo14g3798 360 SUPERFAMILY "Winged helix" DNA-binding domain 30 111 IPR036390 -
Amo14g3798 360 Pfam Dimerisation domain 50 79 IPR012967 GO:0046983
Amo14g3798 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 359 IPR029063 -
Amo14g3798 360 Pfam O-methyltransferase domain 133 340 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3798 Amo-Chr14 143374273 143376327 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3798 92 360 Monolignol Biosynthesis Gene Families AT1G51990 31.250 7.03e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3798 K22588 - ahf:112740688 381.719