Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3792 ATGGGCGACGGCAAGGTCAATCTCCCCGACGATCTCTTCTCCTCCAAGCCCTCTGATTCCAAAGGTTGCCCCTGTTCTGGCAGCTGGTTGTGCTGCGATATTGAAGCCTTCCGAATTGGCATCTGTCGCATTGGAATTGATACTGAAGCACTCAAAGAGCACTTTGGGAAGAAAATTATGGAGCTTGAGGAGGAAAAAAAAAGTGCAGGTTTGGACATAGTTAGAAAACATAAGAATGAAAACAAGGAATCAAAATACTGTTTACAGAAATCTCAAGATGTTCATGGCCAAAAATTGAAAGCACTGGAAGCACAGCACAGAGGAGGTAGAATATATTCGCAAGCTCATAAAACTTTTCGAGAACTCAAACCTGGGGAGGCTGTTTTGGATTGGCCTACGAGAAAAAAAGTGGCTCTAGGAACAGCCCGAGGCCTAGAATATCTTCATGAGCAATGCAATCCTAAGATTATTCATCGGGATGTGAAGGCAGCTAATGTATTACTGGATGTGAAGGCAGCTAATCGATTAAGGTAA 534 0.4345 MGDGKVNLPDDLFSSKPSDSKGCPCSGSWLCCDIEAFRIGICRIGIDTEALKEHFGKKIMELEEEKKSAGLDIVRKHKNENKESKYCLQKSQDVHGQKLKALEAQHRGGRIYSQAHKTFRELKPGEAVLDWPTRKKVALGTARGLEYLHEQCNPKIIHRDVKAANVLLDVKAANRLR* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3792 177 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3792 177 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 118 170 - -
Amo14g3792 177 Gene3D Transferase(Phosphotransferase) domain 1 49 175 - -
Amo14g3792 177 MobiDBLite consensus disorder prediction 1 23 - -
Amo14g3792 177 SUPERFAMILY Protein kinase-like (PK-like) 124 170 IPR011009 -
Amo14g3792 177 PANTHER LRR RECEPTOR KINASE SERK2 118 170 - -
Amo14g3792 177 Pfam Protein kinase domain 126 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3792 177 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3792 Amo-Chr14 143293121 143295665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3792 113 169 Receptor kinase-like Gene Family AT5G10290 75.439 8.03e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Amo14g3792 Pkinase 3.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3792 - - ahf:112766065 111.309