Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3778 ATGGGAAAAGGAAGAGCACCATGCTGTGATAAGTCTCAAGTGAAGAAGGGACCTTGGAGTCCTGCTGAGGATCTTAAGCTTATAGCTTTCATTCAGAAACATGGCCATGAAAACTGGCGTGCCCTTCCGAAACAAGCAGGGCTGATGCGATGTGGGAAAAGTTGCCGTTTGAGATGGATCAATTATTTGAGGCCAGATGTTAAGAGAGGCAATTTTACAGCAGAGGAAGAGGAAACCATAATAAAGCTTCATAAAGCCATGGGGAACAAATGGTCCAAGATTGCATCCCGTTTGCCTGGTCGAACAGACAACGAGATAAAAAATGTGTGGAACACCCACTTGAAGAAGAGATTAACTGCTGCAAAATCTTCAGATTCAAGGGCAGATAATGCAAATGATGGATCTAAGATTGAATCATCAGTGACTTCACCCTCTTCATCTTCGTCTGAATCATTTTTCTCAAATGAAACACCAAAAACTAACAACAACAATCCTTGCAATGAAACCAATGACCATATTTCCCAAACTGATGATGATGATCAAGATTCAGGTGGGAAGTTATTACAAGAAGTAATTGGTATCACTGAAGAGACAAAAGGGTCATCAAATTCATCATCATCAACATCATTATCATCTTGTATTGAATACAAGAAGCATGATGAAGATCAACAACAATTGGTGTCTCCAACATTTTTGAACTGTGTTGCACCCTATGATATTGATGTTACATTGGAAGAGGTTGATAAGCCAAACAACAATAATTTGGAGACAAAAGAAGATTGTGATTTTTGGAAAATGTTAGATAATATTGAATCATTTCTATCATCAAATGAGGCATCTCCTCCTCCTCCTCCTCCTCATCAAAGCCAAACATCACCAACAAATCTTGTTCATCAAGATGATGATGAAGCCACGATGATGATGATGTGGTCCCATGAATTTGAGAATGAGCTTGGAGGAGTGGTAGGTGAAGCAACAACAAAAGGGTCAAATAACAAGGCTCAACAAGAAATAATAATGGACCCATCAAATGATGTATTTGATTTAGATCTTGTGACAAGGCCACCAGAACCCGATCAATTAGAATCAGAATTAGACTTGGGATATATTCAATTGTGGCCCTCTTTGCCACCAAATACTATTCTCTAA 1149 0.389 MGKGRAPCCDKSQVKKGPWSPAEDLKLIAFIQKHGHENWRALPKQAGLMRCGKSCRLRWINYLRPDVKRGNFTAEEEETIIKLHKAMGNKWSKIASRLPGRTDNEIKNVWNTHLKKRLTAAKSSDSRADNANDGSKIESSVTSPSSSSSESFFSNETPKTNNNNPCNETNDHISQTDDDDQDSGGKLLQEVIGITEETKGSSNSSSSTSLSSCIEYKKHDEDQQQLVSPTFLNCVAPYDIDVTLEEVDKPNNNNLETKEDCDFWKMLDNIESFLSSNEASPPPPPPHQSQTSPTNLVHQDDDEATMMMMWSHEFENELGGVVGEATTKGSNNKAQQEIIMDPSNDVFDLDLVTRPPEPDQLESELDLGYIQLWPSLPPNTIL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3778 382 Gene3D - 70 141 - -
Amo14g3778 382 SMART sant 15 65 IPR001005 -
Amo14g3778 382 SMART sant 68 116 IPR001005 -
Amo14g3778 382 PANTHER MYB-RELATED PROTEIN 4 279 - -
Amo14g3778 382 Gene3D - 15 68 - -
Amo14g3778 382 MobiDBLite consensus disorder prediction 119 184 - -
Amo14g3778 382 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Amo14g3778 382 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 279 - -
Amo14g3778 382 CDD SANT 71 114 IPR001005 -
Amo14g3778 382 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Amo14g3778 382 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Amo14g3778 382 MobiDBLite consensus disorder prediction 124 171 - -
Amo14g3778 382 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Amo14g3778 382 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Amo14g3778 382 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Amo14g3778 382 CDD SANT 18 63 IPR001005 -
Amo14g3778 382 MobiDBLite consensus disorder prediction 274 296 - -
Amo14g3778 382 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3778 Amo-Chr14 143060904 143065806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3778 1 160 MYB Transcription Factor Family AT1G56160 62.428 1.84e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Amo14g3778 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3778 K09422 - gmx:100805511 353.599