Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3764 ATGGCAACTTCGAGGACAGTGAAGGATGTCTCTCCTCACGAGTTTGTTAAAGCTTACGCTTCTCACCTTAAGCGTTCTGGCAAGATGGAGCTTCCTGAATGGACAGATCTTGTAAAAACTGCTAGGTTTAAAGAGCTTGCTCCCTATGATCCTGATTGGTACTTTATTAGAGCAGCTTCTATGGCAAGAAAGATCTATCTGAGAGGCGGTCTTGGTGTTGGTGCTTTCAAGAGGATTTATGGTGGTAGCCAGAGGAATGGAAGCCGCCCCCCACATTTCTGCGAGAGCAGTGGTGCTATTGCTAGACACATTTTGCAACAGCTGGAAAGCATGACCATTATTGAGGTTGATCCTAAAGGGGGTAGGAGAATAACTTCAAACGGACGAAGGGATCTTGACCAAGTTGCTGGGAGAATTGTGGTTGCTCCTTGA 432 0.463 MATSRTVKDVSPHEFVKAYASHLKRSGKMELPEWTDLVKTARFKELAPYDPDWYFIRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCESSGAIARHILQQLESMTIIEVDPKGGRRITSNGRRDLDQVAGRIVVAP* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3764 143 PANTHER RIBOSOMAL PROTEIN S19E, WINGED HELIX-TURN-HELIX DNA-BINDING DOMAIN PROTEIN-RELATED 3 143 - -
Amo14g3764 143 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
Amo14g3764 143 Pfam Ribosomal protein S19e 6 140 IPR001266 GO:0003735|GO:0005840|GO:0006412
Amo14g3764 143 Gene3D - 1 142 IPR036388 -
Amo14g3764 143 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Amo14g3764 143 SUPERFAMILY "Winged helix" DNA-binding domain 6 141 IPR036390 -
Amo14g3764 143 PANTHER 40S RIBOSOMAL PROTEIN S19 3 143 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3764 Amo-Chr14 142795634 142797258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3764 1 143 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 83.217 1.16e-91 260