Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3761 ATGGACTACACCACTTGGCCTGAATTTCAGCATGCCCAAACCCAAACCCCAACACTACCCTCTTCATCTTCATTATATTCATACTCATACCCTCCTCTTCCATCTTCATCATCGTACACCGCCAATTTCGTCCCTTACCCTCAAAACCCTAACCCTCCTTCTTCAATTCCTCCCAACACTGTTTTAGAACCTGTGGTCAACCCTCCGGGTGTTGATTCCTATGTTCCTCCATTGCCATTGCCAACAACCCAAGTTGTTGGTGGTCCTGAACAACTTCTTCCCCAAAATTACTCATACACCCAAACCCAAACCCAAATTGTGGGTAATGACCCTAATTCGTTGGTGGCTTCTTCTGGGTACTACTATGATCCCAATGCTCAAAATTGGGGTGATACTGCTGGAGGAGCTGTTATACAATATGGTTCTGACCCTCTTGCTTATGGAGATGTGATCTCTATGGCATCAAATGGCACAGAACAGTTGGCTGTTGCAAATACTAATCCCGCTGCATGGTGGACCAATACAGCTATGCAAGTTCAAGCACAACCTCTTGGCAATAATAAATGGAAGCAGCTGCTGAAGAAGAAACCTAAAACTGTGAATGTTCAACCTGCATATTGCGAAGTTTGCAAGATAGATTGCACCAGCAAAGAGGTATTGGATCAACATAAATTAGGAAAGAAGCACAAGAAGAACGTAGAGAAACTAAGAGAATTATTAAGACCACCCCAGCCACAAGTCCATCCACCGGCCGATGGGTCATCTAATCCGGTTATAGGGCCACAATTGTGGAATAAGTGTAAGAGGAAATCAATTGAAACTCCAGAGAATCTGGAGAAAAAGAAGAAGAAAGTTCTCGAAGGAGGAGCAGCGGCCGCAGCAGTTAAAGTATGTTCTATATGTAATGTGGTATGTAATAGTGAAACAGTTTATAATTTCCACCTTCGCGGACAAAAGCATGCTGCCATGTTGAAGAAAGCATCTGAAAATATACTATCCAATGGAAAATGA 1011 0.4313 MDYTTWPEFQHAQTQTPTLPSSSSLYSYSYPPLPSSSSYTANFVPYPQNPNPPSSIPPNTVLEPVVNPPGVDSYVPPLPLPTTQVVGGPEQLLPQNYSYTQTQTQIVGNDPNSLVASSGYYYDPNAQNWGDTAGGAVIQYGSDPLAYGDVISMASNGTEQLAVANTNPAAWWTNTAMQVQAQPLGNNKWKQLLKKKPKTVNVQPAYCEVCKIDCTSKEVLDQHKLGKKHKKNVEKLRELLRPPQPQVHPPADGSSNPVIGPQLWNKCKRKSIETPENLEKKKKKVLEGGAAAAAVKVCSICNVVCNSETVYNFHLRGQKHAAMLKKASENILSNGK* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3761 336 MobiDBLite consensus disorder prediction 1 24 - -
Amo14g3761 336 SUPERFAMILY beta-beta-alpha zinc fingers 295 326 IPR036236 -
Amo14g3761 336 SMART ZnF_U1_5 293 327 IPR003604 GO:0003676|GO:0008270
Amo14g3761 336 SMART ZnF_U1_5 202 236 IPR003604 GO:0003676|GO:0008270
Amo14g3761 336 PANTHER ZINC FINGER RNA-BINDING PROTEIN 45 328 - -
Amo14g3761 336 Gene3D Classic Zinc Finger 272 328 - -
Amo14g3761 336 SMART c2h2final6 205 229 IPR013087 -
Amo14g3761 336 SMART c2h2final6 296 320 IPR013087 -
Amo14g3761 336 Pfam Zinc-finger of C2H2 type 297 320 - -
Amo14g3761 336 Pfam Zinc-finger of C2H2 type 206 229 - -
Amo14g3761 336 Gene3D Classic Zinc Finger 190 239 - -
Amo14g3761 336 PANTHER - 45 328 - -
Amo14g3761 336 SUPERFAMILY beta-beta-alpha zinc fingers 201 237 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3761 Amo-Chr14 142776959 142778861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3761 207 336 C2H2 Transcription Factor Family AT5G61190 30.405 2.66e-08 53.5