Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3750 ATGGCTCCCTCGAACATCGATATAGCAATGATTACAGAAATACCCATGTCCGGTCGGGGTGAATTCAGAAGGCACTCCACCGGAAAATTAAGTGCTGGAATTGGTGAACAAAAAGCTCTTCCTCATTATCTAAGATCTTCCACTGGCTCCTGTCATGATCATTGTAAATTTGGGAAGAATGAGGAAACTGAAGCAAAGAAGAGACCTTCTATTCCTAAAAGCGGCGAAAGAAAAATTATTCGGCGAAATTCGGAAGAGGTGATCGGAGGGGTAACTATCTTTGTTGACAAGCGTAGAGCATCGCTTGATTCAAAAGCAATGCAAAAGATATCAGTGTTCAAGAACACCGAATCAGTTAAATCTATGGTCCAAAATTCTCATACTTCAGACAGTCAAAAACAAATTGGGAATGAAGTTCCAATGAACAGGAACAGAACATCATTGGCCAAGAAAATGAGGGAAGGAACTTCTTCAAGAGAAATTTCCAAGAAGGAGGAGACTCCACTGATTTCAACGGCGAAAATAATTGGAACTTCATCAAAGAAGCCTTCTTCAAAAGATATTGAGTTGTCTGACAAGCATGTGATTTTTGTGAATGCAAACGCGGAGGCAACGAGGAAAACGGTTTCTAAGAACTCCTCAATGGACTTTGGTGGCAGTAAGAGTAGGGAGATTAAGATCGAAAAGAAGAGGGAAGTCATTTCCGCAGTAGCTTCACCTTCAAGAGTTTCTTTGCCATCATTGAAAGCTTCTCTCAAGAGAATTCCAAGTATTAATGCAAGGAAGCACAAAAGCCTGAAAATTGCCTCTAATCTCAAGAACCAAACCAAGCCTAGAAAAGAAAATCCTGAACCACAACACAATGAGGTTGAGGAAAAGACATTGTATATTCTCGAGGTTGAAAACGAAAGCCAAACTTTGCAATCCGATCATCAAAATGAAAGCCCGGATACCGAATCATCCCTCTCCAATTCACCGCTCACTCAATCCTCATCCGAAGAACGCGGAATCGAAACTGAAAAAGCAACCACTGAGTTTGGGGAGGATACTTCTTCAGGAAGCAATGGAATTGCATGCATGGAAAATGTGAACAATAATAATACTTTGGAAGCTGAGGAGAATGACAAGCCTAGAAAAGATGAAATTTCATGCTCTAAAGAGGAGGAGGGCCAAGTGTTAAGAAAAGTTGAGATCTTTAGCAGGCAAATGGTTGAAACTCAAACTGAGAAAAGACACAATCCAAGGAAGCTAAAGTTCAAGAGAGGAAGTATGTTGTGGAATAATGCTAAGGGTGAAGCTACACAAGGTGTTGTTTTGAGGAATAATTTGAAGGGAAAGAAATATGGGGAGGCATTGATGAACAATGTGATTGAGGAAACTGCAAATAAACTTGTTGAGATCCAGAGAAGCAAGGTTAAGGCATTGGTTGGTGCCTTTGAATCTATAATATCTCAACAGAACAGCAAGAGCCCTTTGGAAAACACCCTAGCACAATAG 1497 0.4055 MAPSNIDIAMITEIPMSGRGEFRRHSTGKLSAGIGEQKALPHYLRSSTGSCHDHCKFGKNEETEAKKRPSIPKSGERKIIRRNSEEVIGGVTIFVDKRRASLDSKAMQKISVFKNTESVKSMVQNSHTSDSQKQIGNEVPMNRNRTSLAKKMREGTSSREISKKEETPLISTAKIIGTSSKKPSSKDIELSDKHVIFVNANAEATRKTVSKNSSMDFGGSKSREIKIEKKREVISAVASPSRVSLPSLKASLKRIPSINARKHKSLKIASNLKNQTKPRKENPEPQHNEVEEKTLYILEVENESQTLQSDHQNESPDTESSLSNSPLTQSSSEERGIETEKATTEFGEDTSSGSNGIACMENVNNNNTLEAEENDKPRKDEISCSKEEEGQVLRKVEIFSRQMVETQTEKRHNPRKLKFKRGSMLWNNAKGEATQGVVLRNNLKGKKYGEALMNNVIEETANKLVEIQRSKVKALVGAFESIISQQNSKSPLENTLAQ* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3750 498 MobiDBLite consensus disorder prediction 259 291 - -
Amo14g3750 498 PANTHER EMB|CAB62594.1 153 394 - -
Amo14g3750 498 PANTHER EMB|CAB62594.1 399 489 - -
Amo14g3750 498 PANTHER EMB|CAB62594.1 1 150 - -
Amo14g3750 498 SMART CaM_binding_2 372 484 IPR012417 GO:0005516
Amo14g3750 498 MobiDBLite consensus disorder prediction 304 361 - -
Amo14g3750 498 MobiDBLite consensus disorder prediction 367 386 - -
Amo14g3750 498 MobiDBLite consensus disorder prediction 304 333 - -
Amo14g3750 498 MobiDBLite consensus disorder prediction 371 386 - -
Amo14g3750 498 MobiDBLite consensus disorder prediction 277 291 - -
Amo14g3750 498 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 399 489 - -
Amo14g3750 498 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 150 - -
Amo14g3750 498 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 153 394 - -
Amo14g3750 498 MobiDBLite consensus disorder prediction 346 361 - -
Amo14g3750 498 Pfam Plant calmodulin-binding domain 378 484 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3750 Amo-Chr14 142656059 142659303 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3750 - - adu:107486674 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3396 20 143166685 143170324 Amo14g3750 14 142656059 142659303 PCT
Amo10g2740 10 92063577 92066993 Amo14g3750 14 142656059 142659303 PCT
Amo14g3750 14 142656059 142659303 Amo20g3396 20 143166685 143170324 PCT
Amo14g3750 14 142656059 142659303 Amo10g2740 10 92063577 92066993 PCT