Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3726 ATGGAATCAATGGAGAATGTTAGAATGCAAAGAGAGAAAGATCAGAAGTTCGAATTGCCGTCCGGCTTTCGATTTCATCCCACCGATGTAGAGCTCATAAATTACTACCTTGTTAAGAAGGTTCTTGATGATAAGCACTTCTGTTCTATAGCAATTGCTGATGCTGATATGAACAAGTCTGAGCCATGGGATTTACCCGGTTTAGCGAAAATGGGCGAAACGGAATGGTATTTTTTCTCTATGAAGGATAGAAAATACCCAACTGGCCAAAGGACTAATAGGGCGACGGAGGCCGGTTATTGGAAGGCCACAGGCAAAGACAAGGAGATATCAAAGGAGAATTCAAAGATTGGGATGAAGAAGACCCTTGTTTTCTACAAAGGAAGAGCTCCAAGAGGTGAAAAGACTAATTGGGTCATGCATGAATATAGATTGGAAGGGAACAAATCTGTTTATAATCTGTCACAACCTGAAAGAGGTGAATGGGTTATATGCAGAGTATTTGAGAAGGGCAATCATGGAAAAAGACTGAATATTGCAAAGTTGGAGAGGCTCAACTCTTTGGGAGAGGAACCATTACCATTGCCAAAACCTACTCCTTTGATGCCTCCATTGATGGATTCTTCATCATCGAGAACCACCCCCGGCGAGTTATCTCAGGCGACGTGCTACTCCTCTGATCCGAATCAAGCCGAAGTCCGGAACAATTTGCATGATGACATAGTTGAAAGCAGGGAAACTCCTATCTTGAACTTTTCCCCTGCTTCCATCAATGAAGAATTTTTTCAGATTCCCAACCAAATTGAGAAACCGGATTGTTATACTCCGCCTCAAGAAAACAACGGATCAATTGCAAGGCAGAATCAGAAATCAGAGTTTGATGCTGATATATCATCTTTGATTTACAACAATGACATGTTTTACAGGTTCTTTGGGAACCAAGAACATTCATCTTCAGCTTCTGCAGACATTTGCAACCTATGGAATTACTAG 993 0.4149 MESMENVRMQREKDQKFELPSGFRFHPTDVELINYYLVKKVLDDKHFCSIAIADADMNKSEPWDLPGLAKMGETEWYFFSMKDRKYPTGQRTNRATEAGYWKATGKDKEISKENSKIGMKKTLVFYKGRAPRGEKTNWVMHEYRLEGNKSVYNLSQPERGEWVICRVFEKGNHGKRLNIAKLERLNSLGEEPLPLPKPTPLMPPLMDSSSSRTTPGELSQATCYSSDPNQAEVRNNLHDDIVESRETPILNFSPASINEEFFQIPNQIEKPDCYTPPQENNGSIARQNQKSEFDADISSLIYNNDMFYRFFGNQEHSSSASADICNLWNY* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3726 330 Gene3D NAC domain 28 175 IPR036093 GO:0003677|GO:0006355
Amo14g3726 330 SUPERFAMILY NAC domain 15 170 IPR036093 GO:0003677|GO:0006355
Amo14g3726 330 MobiDBLite consensus disorder prediction 204 230 - -
Amo14g3726 330 PANTHER ANAC079/ANAC080/ATNAC4 PROTEIN 3 322 - -
Amo14g3726 330 ProSiteProfiles NAC domain profile. 19 170 IPR003441 GO:0003677|GO:0006355
Amo14g3726 330 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
Amo14g3726 330 MobiDBLite consensus disorder prediction 189 230 - -
Amo14g3726 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3726 Amo-Chr14 142295018 142296781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3726 17 330 NAC Transcription Factor Family AT5G07680 46.061 3.53e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo14g3726 NAM 7.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3726 - - gmx:100782172 394.43