Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3675 GGTTATTATGTGAAATTGGAAGAGAGGTCTACTACTAGAGACATAACAATAATGGAAGAGAAGAGAGTAAGTTCCATTAGTTTTGAAGATTCTGTTACAAAGGGTGAGGTGAAAGAAGAAAATGGTAGGTTGAAGATGATCACAGAAAGAGTAGAAGAGAATTATCACTCTCTTCAACTCCAATTCTTTGATATCCTTACAAAAAAAGCATTCAAAGAAGTTGTGAGTGATTCAGCTACWAACACAATTGGTGATGAAACTGAAGAGGAGCATGAACTTGTTTCACTTTGCCTTGGAAGGAATCCAAGTAAGCATAACAAAGATGTTGCAAGAATTGGAAACAACTCCAAAAACAAGGTTAATAAAGAAAATGAAGAGTTTGAAAAACCATGTTTAACTCTTGGATTAGACTCTAAATGTGTGCTGCCAAAGGAATCGGCAGAGGAAACTTTGTCATCAATAACACAGAAACATCAAGTGAAAGTGAAAAATAGTTCAAATGATGGAAGTTCAGATCAAATGCCTGCTAAGAGAGCCAGAGTTTCTGTTAGAGCTAGATGTGATTCTCCTACGATGAATGATGGATGCCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAAATCCATGTCCACGAGCATACTATCGTTGCACGGTCGCACCGGCATGTCCGGTTAGGAAACAGGTGCAAAGATGTGCTGAAGACTTGTCCATCTTGATCACAACATACGAAGGAACACATAACCATCCACTTCCATTTTCAGCATCAGCCATAGCTTCCACAACTTCTGCTGCAGCTTCCATGCTTATTTCAGGTTCTTCAGAGAGTCACAATTCTTCATTTTTTAAAAATGTGTCAACACTACACACTGGTGTATGTCTCGGTCAGCAGTTTGATCAATCAAGAGCAACAAAAAATGTCTTCCTACCAAACAATAATGTAACTTTAGACCTCACTTCTTCTGCTTCAAACACTTTATTACCTTCAAACACTTCTTCTGCTAACCTTTTCACAATGCCTATTCCTTTTGWGGAGAAAACACACATAATAAGGCCAGTTATGTTGAGAAACTCTTCAAGTTGGGGTAAGCATTTTTATGAAGAGTYCARYAGGAACCYAACTCTWCATCCTCCAAAGGATGCTTTTTTAGCAGAAACAATAACAAAAGCAATGAAAACAGATCCAAGTCTTCATTCTGTGATAGCTGCTGCAGTTTCATCTATTGTGGGGCAACAAGGATATTCAGCAAGTTGCAACAATCAAGAAGGGTCAGAGATTCTTATACCTTCAACTCAATTGGGATCTTCCATTCCCTTCAATCAAAGTAACAAAGGATACATAGAAATAGAAGGGTACTTCAAAAGATTGTTGTCCTCAAGTTCTGGTGCTGGAGACATGCTTCCATAG 1410 0.3801 GYYVKLEERSTTRDITIMEEKRVSSISFEDSVTKGEVKEENGRLKMITERVEENYHSLQLQFFDILTKKAFKEVVSDSATNTIGDETEEEHELVSLCLGRNPSKHNKDVARIGNNSKNKVNKENEEFEKPCLTLGLDSKCVLPKESAEETLSSITQKHQVKVKNSSNDGSSDQMPAKRARVSVRARCDSPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCAEDLSILITTYEGTHNHPLPFSASAIASTTSAAASMLISGSSESHNSSFFKNVSTLHTGVCLGQQFDQSRATKNVFLPNNNVTLDLTSSASNTLLPSNTSSANLFTMPIPFXEKTHIIRPVMLRNSSSWGKHFYEEXXRNXTLHPPKDAFLAETITKAMKTDPSLHSVIAAAVSSIVGQQGYSASCNNQEGSEILIPSTQLGSSIPFNQSNKGYIEIEGYFKRLLSSSSGAGDMLP* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3675 469 ProSiteProfiles WRKY domain profile. 187 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g3675 469 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 31 464 - -
Amo14g3675 469 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 31 464 IPR044810 GO:0003700
Amo14g3675 469 MobiDBLite consensus disorder prediction 151 179 - -
Amo14g3675 469 MobiDBLite consensus disorder prediction 151 173 - -
Amo14g3675 469 SUPERFAMILY WRKY DNA-binding domain 185 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo14g3675 469 SMART WRKY_cls 192 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g3675 469 Pfam WRKY DNA -binding domain 193 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g3675 469 Gene3D WRKY domain 177 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3675 Amo-Chr14 141599959 141602441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3675 36 267 WRKY Transcription Factor Family AT5G15130 50.775 5.17e-65 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo14g3675 WRKY 4.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3675 - - adu:107486739 837.795