Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3662 CAGAACAGCAATGACGAAGCACAGGTTCGAATGCACAGTCTCTTCCCATTACCAACAAAAACCCCAGGCTACAATTTCCCGCTCACTCTACCGACTGTCGCTTTCTTTGTCTCTCTGTCGATTGAAAATGGGAAACCGATGCTGAAGCTCAATACTCTCCACAGTTCTGCTTCAGCTCAAGCTTCTTCCTCTTCCTCTCTGCAATGGCTAGGTTTAGAAGGGGAAGGGAAAGAAGTGAAAGGTTTGAAGAGTAAAAGGAGCTGGCTTATTGACATAGGTGGATTTGCAAAGAAAGTGAAAAGCACTAATTTATCTCCAGCTGATCAAATCAAAGATTGTGGGGCATATCGTGATTGTCCAAACTGCCATTACCGTATTGATAACCGTGATGTTTCTACTGAGTGGCCTGGCTTTCCTCTTGGTGTGAAGTTTGATCCTTCTGATGTAGAACTCCTAGAACATTTAGCAGGAAAATGTGGCATTGGAAATGCTCAGCTGCATATGTTTATTAATGAGTTCATTCCAACAATAGAAGAAGAAGAAGGTATTTGCTATACACATCCAGAAAATCTTCCAGGTGTCAAGAAAGATGGGAGCAGTGCCCATTTCTTTCATAGAACAACCAATGCCTATACTACTGGTCAACGGAAGCGTCGAAAGATTCATCATCAATGTTTGACTGAAGAGCATGTACGGTGGCATAAGACTGGTAAGACAAAAGCTATATTGGAGGATGGAGTGCATAAGGGCTTTAAGAAGATCATGGTTCTTTATATAAGACCTAAGAAAGGGTCCAAACCTGATAAAACGAATTGGGTGATGCACCAATATCATTTAGGAACTGATGAAGAGGAGAAGAACGGTGAATATGTGGTTTCAAAGATTTTTCAGAAGCAAACTGAGAAAAATGAGGAGAATCCAGCGGTCGAAGATTCTGACCAGAATGAGAAAAATGAGAATCGATTGGCTGATGATTCCAACTGTATAGCATCCCGAACCAGTCCTAGAACTCCGAAACCAAATCCCCCAAATCCACCTAGAGCTGGAAATTTTGTTGACAATGATGATAATATTGACGAAACTGAACTTCCATTCACTCAGGATGTGAAATGTGTCCCACAATGTGATGTTCTGGATCAGAACAATGCTGGTGACCCTGCATGGCTGGCAGGTGAATCGCAGGCTGTGGAAAACTTCGACTTTGATGGCTTGGATGACATCTTGTTCTGCAATGAAATATTCGATTCATCATCTCTACTAGATATTTCTGGAACGGAAACCATGATAAATGGATCTGCTTCAAACGATATGCTTGGGAATGATGGTTTATCATACGGAACTTCCGTTCTTGATACCCTTGACTTGGGTACTCCCCCAGATTTTGATCTTTCAAATCTGAATTTTTACTCTCAAGATAGTATTTTCGACTGGGTCGACAGATTATGA 1446 0.4156 QNSNDEAQVRMHSLFPLPTKTPGYNFPLTLPTVAFFVSLSIENGKPMLKLNTLHSSASAQASSSSSLQWLGLEGEGKEVKGLKSKRSWLIDIGGFAKKVKSTNLSPADQIKDCGAYRDCPNCHYRIDNRDVSTEWPGFPLGVKFDPSDVELLEHLAGKCGIGNAQLHMFINEFIPTIEEEEGICYTHPENLPGVKKDGSSAHFFHRTTNAYTTGQRKRRKIHHQCLTEEHVRWHKTGKTKAILEDGVHKGFKKIMVLYIRPKKGSKPDKTNWVMHQYHLGTDEEEKNGEYVVSKIFQKQTEKNEENPAVEDSDQNEKNENRLADDSNCIASRTSPRTPKPNPPNPPRAGNFVDNDDNIDETELPFTQDVKCVPQCDVLDQNNAGDPAWLAGESQAVENFDFDGLDDILFCNEIFDSSSLLDISGTETMINGSASNDMLGNDGLSYGTSVLDTLDLGTPPDFDLSNLNFYSQDSIFDWVDRL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3662 481 MobiDBLite consensus disorder prediction 298 323 - -
Amo14g3662 481 Pfam No apical meristem (NAM) protein 139 279 IPR003441 GO:0003677|GO:0006355
Amo14g3662 481 ProSiteProfiles NAC domain profile. 138 298 IPR003441 GO:0003677|GO:0006355
Amo14g3662 481 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 85 479 - -
Amo14g3662 481 SUPERFAMILY NAC domain 123 298 IPR036093 GO:0003677|GO:0006355
Amo14g3662 481 MobiDBLite consensus disorder prediction 298 359 - -
Amo14g3662 481 Gene3D NAC domain 148 303 IPR036093 GO:0003677|GO:0006355
Amo14g3662 481 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 85 479 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3662 Amo-Chr14 141399482 141403210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3662 116 296 NAC Transcription Factor Family AT4G28500 56.831 1.31e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo14g3662 NAM 3.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3662 - - gmx:100794879 535.798