Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3656 ATGGGTGTGGCTCAAAACATTCCTGACATGGAGGAGGAGGGAACCTTGGAGATTGGAATGGAATACAGAACTGTGTCTGGTGTTGCTGGACCGTTGGTTATTCTTGATAAAGTTAAGGGACCAAAATTTCAAGAGATTGTTAATATTCGGTTAGGGGATGGAACTTCTCGGCGTGGACAAGTTCTAGAAGTTGATGGTGAGAAAGCTGTTGTTCAGGTCTTTGAAGGTACCTCTGGGATTGACAATAAGTTTACAACTGTGCAATTTACTGGAGAGGTATTGAAAACTCCTGTTTCGCTTGACATGCTTGGCCGCATATTTAATGGCTCGGGAAAACCCATTGATAATGGTCCACCCATATTACCAGAGGCTTACTTGGACATATCAGGAAGTTCCATCAATCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAAACCGGAATTTCTACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAAGATCCCTCTATTCTCAGCTGCTGGTCTCCCCCATAATGAAATTGCTGCACAGATATGTCGTCAGGCTGGCTTAGTCAAGCGATTAGAGAAATCTGATAATCTTCTTGAGGGTGGAGAAGACGACAATTTTGCCATCGTGTTTGCTGCTATGGGAGTTAACATGGAGACTGCACAGTTTTTCAAGCGTGACTTTGAAGAGAATGGCTCAATGGAAAGAGTGACCCTTTTCCTGAATCTGGCCAATGATCCTACAATTGAGCGTATCATCACCCCTCGTATTGCTCTTACTACTGCTGAATATCTGGCTTATGAATGTGGCAAGCATGTTCTTGTGATACTCACAGATATGAGTTCATATGCCGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTGCCAGGACGACGTGGTTATCCCGGTTACATGTACACAGATCTTGCAACAATATACGAACGTGCTGGAAGAATCGAGGGGCGAAAAGGCTCTATTACTCAGATTCCTATTCTAACTATGCCAAATGATGATATCACGCATCCAACTCCCGATCTTACAGGATACATTACCGAGGGACAGATATATATTGACAGACAGCTGCATAACAGGCAGATATATCCACCAATCAATGTCCTTCCGTCACTGTCTCGATTGATGAAGAGTGCCATCGGCGAGGGAATGACTCGAAAGGATCATTCTGATGTATCCAACCAGCTCTATGCAAATTATGCCATAGGAAAGGATGTTCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGCACTTTCATCAGAGGACTTGCTATATCTGGAATTTCTGGACAAATTCGAGCGAAAGTTTGTGACGCAAGGAGCTTATGACACCCGCAACATCTTCCAGTCACTAGATCTTGCGTGGACCTTGCTTCGGATCTTTCCCCGGGAGCTTCTTCACCGTATACCGGCCAAGACCCTCGACCAGTTCTACAGCCGAGATTCCGGTAATTGA 1470 0.4463 MGVAQNIPDMEEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTSRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDSGN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3656 489 Gene3D - 30 488 - -
Amo14g3656 489 Pfam ATP synthase alpha/beta family, beta-barrel domain 25 91 IPR004100 GO:0046034|GO:1902600
Amo14g3656 489 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 148 378 IPR000194 GO:0005524
Amo14g3656 489 Hamap V-type ATP synthase beta chain [atpB]. 19 487 IPR022879 -
Amo14g3656 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 384 IPR027417 -
Amo14g3656 489 CDD ATP-synt_V_A-type_beta_N 21 92 - -
Amo14g3656 489 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 3 489 IPR022879 -
Amo14g3656 489 ProSitePatterns ATP synthase alpha and beta subunits signature. 369 378 IPR020003 GO:0005524
Amo14g3656 489 CDD ATP-synt_V_A-type_beta_C 388 482 - -
Amo14g3656 489 CDD V_A-ATPase_B 93 380 - -
Amo14g3656 489 TIGRFAM V-ATPase_V1_B: V-type ATPase, B subunit 21 487 IPR005723 GO:0033180|GO:0046961|GO:1902600
Amo14g3656 489 PIRSF V-ATPsynth_beta/V-ATPase_B 12 489 IPR022879 -
Amo14g3656 489 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 3 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3656 Amo-Chr14 141280234 141285070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3656 1 489 Primary Pumps ATPases(2) AT4G38510 96.524 0.0 968
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3656 K02147 - gmx:100791429 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3656 14 141280234 141285070 Amo04g2542 04 98278583 98283407 hybridization