Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3628 ATGCCACCAATAATGTTCCAAAATACTACTATTGTCTTAACATTCCTTTGTGTCCTTATTCTAAAACTCTCTTCAGCTGATCAAAACATTGAAGCAGATGCACTCTTAAAGTGGAAGGCCACACTTGAGAAGCAAAGCCAAGTTATGTTATCATCTTGGAACAACGGCACAAGTCCATGCAGATGGAAAGGGATTCAATGTGACAAATCAAAGTCAATCACAACCATCAATCTTGAAAACTTTGGACTCAAAGGTACACTTCACAGTCTTAGTTTCTCTTCATTCCCCAACCTCATTTCCATAAACATATACAACAACTTGTTCCATGGAACCATTCCACCACAAATTGCTAACGTGTCCAAAGTTAACAGCTTGAACATGTCTTCAAATCTTTTTGATGGTTCTATCCCTAAAGAGTTGTGGACATTGAGCAGTTTACAGAGTCTTGATCTTTCTTTGTGCCATCTAAGTGGATCAATCCCAGGTTCCATTTCGAATTTGGCCAACTTATCATTTCTAGATTTATCTGATAATTACAATCTGTCAGGCCTAATTCCACCTGAGATTGGTAAACTGAACAAACTTGTGTTTCTTGGGATTGGAAACAATCAAATCTCTGGCTCCATTCCCCAAGAAATTGGAATGTTAACAAAGCTTGAGTATCTTGAATTATCAAGAAACACTCTTTCTGGTACTATCCCTTCAACAATTGCTAACATGAGCAGTTTAAATAGGCTTTACCTTGCTAATAACACCTTGTTTGGGCCAATCCCAGATTCCATGTGGAACATGTCTACCTTGTCATGGCTAAACCTTTATAATAACCAACTTTCTGGATCAATCCCTGCTTCAATAGAAAACTTGGTCAATCTGGAGTTACTTGAAATTGAGAAGAACCATTTTTCAGGATCCATTCCTTCCACAATTGGAAACATGACAAAGCTCACCTGGATATTTCTTCGCCACAATAATTTTTCTGGCGAAATTCCTAGCTCCATTGGTAATTTGATCAATTTGATCACCCTTGCTCTTCAAGGAAACAATCTATCAGGAGCTATTCCTGATACAGTTGGAAAGTTGAAAAGCCTATACTCTTTAGAATTGTCTGCCAACAAACTCAGTGGTAGCATTCCACAAGTTATCAATAACCTTACCAACATGGTTTACTTTTTGGTAGAAGAAAATGATCTCTCCGGCCACTTGCCACCTCAAATTTGCTTAGGTGGTTCATTAGGATACTTGATTGCTGGTAACAATCATTTTACTGGTCCAATTCCAAGTAGCTTGAAGAACTGCTCTAATCTTGCTAGAATTAGGTTAGAGTATAACCATTTGGAAGGAGACCTAACACAAGACTTTGGTATGTATCCTAATTTGAAATTCATTGATCTGAGTGACAATAAATTATATGGCCAAATTTCGCCAGATTGGGGGAAGTGCCAAAATCTTGAAAACTTGATAATATCCAACAATAACATTTCTGGTGGCATACCATCAGAAATTGGTGAACTTACCAACTTGGGAAGACTTCACCTTTTCTCCAACCAATTAACTGGAAAGATTCCAAGAGAATTGGGAAATATGAAAAGCCTGCTTGAATTCAAGATCAGTGACAACCATTTCTCAGGAAATATTCCAGCAGAAATAGGACTATTGCATGATCTTCAAATCTTGCACCTTGGAGGAAATGAGTTGAGTGGCAATATACCAAGACAAGTTGTGCAGTTACCCAACTTGTTGGAATTGAACTTGAGCAACAACAAACTACAGGGAAGCATCCCCTCTGACTTCCAGTCGTCGCAGCCTCTGTATTCTCTTGATCTTAGTGGGAATATGTTGCATGGACAAATACCAACAGTGCTTGGAGAGTTGAAACAATTGAAATTGTTGAACCTCTCTCACAACAATCTTTCTGGCACCATTCCATCAAGTTTTAATGGTATGTCAAGCTTGATTTCTGTCAACATATCATACAACCAGTTAGAAGGGCCGCTTCCAGACAATAACCGAGCCTTTCAGAATGCTACGATTGAATCATTGAAAAATAACAAAGGCTTGTGTGGTAATATCACTGGCTTGGTGCCATGCCCAAGCAGCAGTCCTAGCCGTAAAAGTCACAAGGTCATGTTATTGGTATTACTTGTTATATTTGGAGTACTAGTACTTGTGCTTTGTATGGCGGCTGTTTCATTGTACTTTCTTTGTAGAAGTGCTAGAAACAAAGACAACTCAGCTAAAGAAGTGCAACAAGTGGAAGAACACTTTTCCATATGGAGCCATGATGGAAAAATGGCGTTTGAAACTATCATTGAAGCTACCAATAACTTTGATGAGAAACATCTCATTGGAATTGGAGGGCAAGGATCCGTTTACAGGGCTGAGTTGCCTTCAGGAATGGTTGTTGCTGTGAAGAAACTTCATACTGAATCAGATGCAGAGGATAAGTCCAATTTGAAAGCTTTTGAGAATGAAATTGAAGCATTGACAGAAATGAGGCACCGCAACATCATAAAGCTATATGGATTCTGCCAGCATTCTCGGTTCTCTTTTTTGGTTTATGAATTCTTGGAAGGTGGCAGTTTGGATCAAGTATTTGGCAATGAAGCAAAAGCAAGTGCATTTGATTGGATGAAGAGGGTGAATGTGGTTAAAGGAGTTGCTAATGCTTTGTCATACATGCATCATGATTGCAAACCCCCTATGGTTCATCGCGACATATCAAGCAAGAACATTCTATTGGACTCAGAATATGAAGCTCATGTCTCTGACTTTGGGACTGCTAAGTTTTTAAAGCCAGATTCAAATTGGACCACACTTGCAGTCACCTATGGTTATGGAGCTCCAGAGCTAGCTCAGACTATGGAAGTGACAGAGAAATGTGATGTATATAGCTTTGGAGTTCTTAGTTTGGAGATCCTCATGGGAAAGCATCCAGGAGATTTGATCAACTCATTGTTGTCACCATCAACAGCATCAATAACATACAATTTGTTATTGGTTGATGTCATAGATCATAGACCTCCTTATCCTAAGAACTCAATTGTTGGGGAAATCATGTGGATCACAAAGTGGGCACTTGAGTGCTTGAGCCAAAGTCCACAATTTCGGCCAACCATGCATCAAGTTTCTAAAGAGCTTATGATGGGAAAAGCACCTTTACCTGATGACCAATTTCCTATGATCAGGATTGGACAACTCAATGAAGAATGGGAAACTCCACTTATTTGA 3228 0.391 MPPIMFQNTTIVLTFLCVLILKLSSADQNIEADALLKWKATLEKQSQVMLSSWNNGTSPCRWKGIQCDKSKSITTINLENFGLKGTLHSLSFSSFPNLISINIYNNLFHGTIPPQIANVSKVNSLNMSSNLFDGSIPKELWTLSSLQSLDLSLCHLSGSIPGSISNLANLSFLDLSDNYNLSGLIPPEIGKLNKLVFLGIGNNQISGSIPQEIGMLTKLEYLELSRNTLSGTIPSTIANMSSLNRLYLANNTLFGPIPDSMWNMSTLSWLNLYNNQLSGSIPASIENLVNLELLEIEKNHFSGSIPSTIGNMTKLTWIFLRHNNFSGEIPSSIGNLINLITLALQGNNLSGAIPDTVGKLKSLYSLELSANKLSGSIPQVINNLTNMVYFLVEENDLSGHLPPQICLGGSLGYLIAGNNHFTGPIPSSLKNCSNLARIRLEYNHLEGDLTQDFGMYPNLKFIDLSDNKLYGQISPDWGKCQNLENLIISNNNISGGIPSEIGELTNLGRLHLFSNQLTGKIPRELGNMKSLLEFKISDNHFSGNIPAEIGLLHDLQILHLGGNELSGNIPRQVVQLPNLLELNLSNNKLQGSIPSDFQSSQPLYSLDLSGNMLHGQIPTVLGELKQLKLLNLSHNNLSGTIPSSFNGMSSLISVNISYNQLEGPLPDNNRAFQNATIESLKNNKGLCGNITGLVPCPSSSPSRKSHKVMLLVLLVIFGVLVLVLCMAAVSLYFLCRSARNKDNSAKEVQQVEEHFSIWSHDGKMAFETIIEATNNFDEKHLIGIGGQGSVYRAELPSGMVVAVKKLHTESDAEDKSNLKAFENEIEALTEMRHRNIIKLYGFCQHSRFSFLVYEFLEGGSLDQVFGNEAKASAFDWMKRVNVVKGVANALSYMHHDCKPPMVHRDISSKNILLDSEYEAHVSDFGTAKFLKPDSNWTTLAVTYGYGAPELAQTMEVTEKCDVYSFGVLSLEILMGKHPGDLINSLLSPSTASITYNLLLVDVIDHRPPYPKNSIVGEIMWITKWALECLSQSPQFRPTMHQVSKELMMGKAPLPDDQFPMIRIGQLNEEWETPLI* 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3628 1075 SMART LRR_typ_2 624 647 IPR003591 -
Amo14g3628 1075 SMART LRR_typ_2 143 167 IPR003591 -
Amo14g3628 1075 SMART LRR_typ_2 312 336 IPR003591 -
Amo14g3628 1075 SMART LRR_typ_2 216 240 IPR003591 -
Amo14g3628 1075 SMART LRR_typ_2 504 528 IPR003591 -
Amo14g3628 1075 SMART LRR_typ_2 264 288 IPR003591 -
Amo14g3628 1075 SMART LRR_typ_2 360 384 IPR003591 -
Amo14g3628 1075 SMART LRR_typ_2 576 599 IPR003591 -
Amo14g3628 1075 Gene3D Ribonuclease Inhibitor 29 181 IPR032675 -
Amo14g3628 1075 Gene3D Ribonuclease Inhibitor 281 382 IPR032675 -
Amo14g3628 1075 Pfam Leucine rich repeat 603 661 IPR001611 GO:0005515
Amo14g3628 1075 Pfam Leucine rich repeat 218 277 IPR001611 GO:0005515
Amo14g3628 1075 SUPERFAMILY RNI-like 76 398 - -
Amo14g3628 1075 PANTHER LRR RECEPTOR-LIKE KINASE 156 253 - -
Amo14g3628 1075 PANTHER LRR RECEPTOR-LIKE KINASE 244 1066 - -
Amo14g3628 1075 Gene3D Phosphorylase Kinase; domain 1 735 855 - -
Amo14g3628 1075 SUPERFAMILY RNI-like 353 676 - -
Amo14g3628 1075 PRINTS Leucine-rich repeat signature 219 232 - -
Amo14g3628 1075 PRINTS Leucine-rich repeat signature 576 589 - -
Amo14g3628 1075 Gene3D Ribonuclease Inhibitor 395 705 IPR032675 -
Amo14g3628 1075 SUPERFAMILY Protein kinase-like (PK-like) 755 1046 IPR011009 -
Amo14g3628 1075 Pfam Protein kinase domain 777 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3628 1075 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 244 1066 - -
Amo14g3628 1075 ProSitePatterns Tyrosine protein kinases specific active-site signature. 901 913 IPR008266 GO:0004672|GO:0006468
Amo14g3628 1075 Gene3D Ribonuclease Inhibitor 182 280 IPR032675 -
Amo14g3628 1075 ProSiteProfiles Protein kinase domain profile. 776 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3628 1075 Gene3D Transferase(Phosphotransferase) domain 1 856 1053 - -
Amo14g3628 1075 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 172 - -
Amo14g3628 1075 PANTHER LRR RECEPTOR-LIKE KINASE 10 172 - -
Amo14g3628 1075 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Amo14g3628 1075 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 156 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3628 Amo-Chr14 140887013 140890683 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3628 7 948 Receptor kinase-like Gene Family AT4G08850 43.555 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo14g3628 Pkinase 9.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3628 - - aip:107635237 1467.21